4DJZ
Catalytic fragment of masp-1 in complex with its specific inhibitor developed by directed evolution on sgci scaffold
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C (A, C) | Mannan-binding lectin serine protease 1 heavy chain | polymer | 155 | 17508.2 | 2 | UniProt (P48740) Pfam (PF00084) | Homo sapiens (human) | Mannan-binding lectin serine protease 1, Complement factor MASP-3, Complement-activating component of Ra-reactive factor, Mannose-binding lectin-associated serine protease 1, MASP-1, Mannose-binding protein-associated serine protease, Ra-reactive factor serine protease p100, RaRF, Serine protease 5 |
| 2 | B, D (B, D) | Mannan-binding lectin serine protease 1 light chain | polymer | 251 | 28028.9 | 2 | UniProt (P48740) Pfam (PF00089) | Homo sapiens (human) | Mannan-binding lectin serine protease 1, Complement factor MASP-3, Complement-activating component of Ra-reactive factor, Mannose-binding lectin-associated serine protease 1, MASP-1, Mannose-binding protein-associated serine protease, Ra-reactive factor serine protease p100, RaRF, Serine protease 5 |
| 3 | E, F (H, I) | Protease inhibitor SGPI-2 | polymer | 38 | 4088.6 | 2 | UniProt (O46162) Pfam (PF05375) | Schistocerca gregaria (desert locust) | Protease inhibitor SGPI-2, Schistocerca gregaria chymotrypsin inhibitor, SGCI |
| 4 | G, H (B, D) | water | water | 18.0 | 2 | Chemie (HOH) |
Sequence modifications
A, C: 298 - 448 (UniProt: P48740)
B, D: 449 - 699 (UniProt: P48740)
H, I: 4 - 38 (UniProt: O46162)
| PDB | External Database | Details |
|---|---|---|
| Ala 294 | - | expression tag |
| Ser 295 | - | expression tag |
| Met 296 | - | expression tag |
| Thr 297 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Lys 499 | Glu 499 | variant |
| PDB | External Database | Details |
|---|---|---|
| Gly 1 | - | expression tag |
| Ser 2 | - | expression tag |
| Gly 3 | - | expression tag |
| Phe 30 | Ala 83 | engineered mutation |
| Arg 33 | Leu 86 | engineered mutation |
| Leu 35 | Ala 88 | engineered mutation |
| Tyr 37 | Pro 90 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 99251.5 | |
| All* | Total formula weight | 99251.5 |






