4DJZ
Catalytic fragment of masp-1 in complex with its specific inhibitor developed by directed evolution on sgci scaffold
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-10-06 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97942 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 71.327, 98.404, 155.531 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.910 - 3.200 |
R-factor | 0.23045 |
Rwork | 0.228 |
R-free | 0.27414 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDB entries: 2XTT (structure of SGPI-1) and 3GOV |
RMSD bond length | 0.006 |
RMSD bond angle | 1.036 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | REFMAC (5.6.0117) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 46.910 | 46.910 | 3.370 |
High resolution limit [Å] | 3.200 | 10.120 | 3.200 |
Rmerge | 0.238 | 0.066 | 0.925 |
Number of reflections | 18731 | ||
<I/σ(I)> | 7.6 | 16.4 | 2.3 |
Completeness [%] | 99.9 | 98.7 | 100 |
Redundancy | 6.8 | 5.6 | 7.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293 | 0.1M Hepes, 25% PEG1000, 0.3M NaNO3, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K |