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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

4D6U

Cytochrome bc1 bound to the 4(1H)-pyridone GSK932121

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1ACYTOCHROME B-C1 COMPLEX SUBUNIT 1, MITOCHONDRIALpolymer48052796.41UniProt (P31800)
Pfam (PF00675)
Pfam (PF05193)
In PDB		BOS TAURUS (CATTLE)COMPLEX III SUBUNIT 1, CORE PROTEIN I, UBIQUINOL-CYTOCHROME- C REDUCTASE COMPLEX CORE PROTEIN 1
2BCYTOCHROME B-C1 COMPLEX SUBUNIT 2, MITOCHONDRIALpolymer45348203.41UniProt (P23004)
Pfam (PF00675)
Pfam (PF05193)
In PDB		BOS TAURUS (CATTLE)COMPLEX III SUBUNIT 2, CORE PROTEIN II, UBIQUINOL-CYTOCHROME-C REDUCTASE COMPLEX CORE PROTEIN 2
3C, PCYTOCHROME Bpolymer37942620.32UniProt (P00157)
Pfam (PF00033)
Pfam (PF00032)
In PDB		BOS TAURUS (CATTLE)COMPLEX III SUBUNIT 3, COMPLEX III SUBUNIT III, CYTOCHROME B-C1 COMPLEX SUBUNIT 3, UBIQUINOL-CYTOCHROME-C REDUCTASE COMPLEX CYTOCHROME B SUBUNIT
4D, QCYTOCHROME C1, HEME PROTEIN, MITOCHONDRIALpolymer32535343.82UniProt (P00125)
Pfam (PF02167)
In PDB		BOS TAURUS (CATTLE)COMPLEX III SUBUNIT 4, COMPLEX III SUBUNIT IV, CYTOCHROME B-C1 COMPLEX SUBUNIT 4, UBIQUINOL-CYTOCHROME-C REDUCTASE COMPLEX CYTOCHROME C1 SUBUNIT, CYTOCHROME C-1, CYTOCHROME BC1
5E, I, RCYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIALpolymer27429586.83UniProt (P13272)
Pfam (PF00355)
Pfam (PF09165)
Pfam (PF02921)
In PDB		BOS TAURUS (CATTLE)COMPLEX III SUBUNIT 5, CYTOCHROME B-C1 COMPLEX SUBUNIT 5, RIESKE IRON-SULFUR PROTEIN, RISP, UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT, COMPLEX III SUBUNIT IX, UBIQUINOL-CYTOCHROME C REDUCTASE 8 KDA PROTEIN
6F, SCYTOCHROME B-C1 COMPLEX SUBUNIT 7polymer11113502.42UniProt (P00129)
Pfam (PF02271)
In PDB		BOS TAURUS (CATTLE)COMPLEX III SUBUNIT 7, COMPLEX III SUBUNIT VII, QP-C, UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 14 KDA PROTEIN
7G, TCYTOCHROME B-C1 COMPLEX SUBUNIT 8polymer829737.22UniProt (P13271)
Pfam (PF02939)
In PDB		BOS TAURUS (CATTLE)COMPLEX III SUBUNIT 8, COMPLEX III SUBUNIT VIII, UBIQUINOL- CYTOCHROME C REDUCTASE COMPLEX 9.5 KDA PROTEIN, UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX UBIQUINONE-BINDING PROTEIN QP-C
8H, UCYTOCHROME B-C1 COMPLEX SUBUNIT 6, MITOCHONDRIALpolymer9110638.72UniProt (P00126)
Pfam (PF02320)
In PDB		BOS TAURUS (CATTLE)COMPLEX III SUBUNIT 6, COMPLEX III SUBUNIT VIII, CYTOCHROME C1 NON-HEME 11 KDA PROTEIN, MITOCHONDRIAL HINGE PROTEIN, UBIQUINOL- CYTOCHROME C REDUCTASE COMPLEX 11 KDA PROTEIN
9J, WCYTOCHROME B-C1 COMPLEX SUBUNIT 9polymer647469.62UniProt (P00130)
Pfam (PF05365)
In PDB		BOS TAURUS (CATTLE)COMPLEX III SUBUNIT 9, COMPLEX III SUBUNIT X, CYTOCHROME C1 NON-HEME 7 KDA PROTEIN, UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 7.2 KDA PROTEIN
10NCYTOCHROME B-C1 COMPLEX SUBUNIT 1, MITOCHONDRIALpolymer48052768.41UniProt (P31800)
Pfam (PF00675)
Pfam (PF05193)
In PDB		BOS TAURUS (CATTLE)COMPLEX III SUBUNIT 1, CORE PROTEIN I, UBIQUINOL-CYTOCHROME- C REDUCTASE COMPLEX CORE PROTEIN 1
11OCYTOCHROME B-C1 COMPLEX SUBUNIT 2, MITOCHONDRIALpolymer45348204.41UniProt (P23004)
Pfam (PF00675)
Pfam (PF05193)
In PDB		BOS TAURUS (CATTLE)COMPLEX III SUBUNIT 2, CORE PROTEIN II, UBIQUINOL-CYTOCHROME-C REDUCTASE COMPLEX CORE PROTEIN 2
12VCYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIALpolymer27429572.81UniProt (P13272)
Pfam (PF09165)
Pfam (PF02921)
Pfam (PF00355)
In PDB		BOS TAURUS (CATTLE)COMPLEX III SUBUNIT 5, CYTOCHROME B-C1 COMPLEX SUBUNIT 5, RIESKE IRON-SULFUR PROTEIN, RISP, UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT, COMPLEX III SUBUNIT IX, UBIQUINOL-CYTOCHROME C REDUCTASE 8 KDA PROTEIN
13P, CPROTOPORPHYRIN IX CONTAINING FEnon-polymer616.54Chemie (HEM)
14P, C3-chloro-6-(hydroxymethyl)-2-methyl-5-{4-[3-(trifluoromethoxy)phenoxy]phenyl}pyridin-4-olnon-polymer425.82Chemie (G8U)
15D, E, F, N, P...PHOSPHATE IONnon-polymer95.09Chemie (PO4)
16D, P, Q, C1,2-dioleoyl-sn-glycero-3-phosphoethanolaminenon-polymer744.04Chemie (PEE)
17Q, DHEME Cnon-polymer618.52Chemie (HEC)
18D, G, Q, TCARDIOLIPINnon-polymer1464.04Chemie (CDL)
19RFE2/S2 (INORGANIC) CLUSTERnon-polymer175.81Chemie (FES)
20RGLYCEROLnon-polymer92.11Chemie (GOL)
Sequence modifications
F, S: 0 - 110 (UniProt: P00129)
PDBExternal DatabaseDetails
Asp 56Asn 57conflict
N: -33 - 446 (UniProt: P31800)
PDBExternal DatabaseDetails
Lys 445Arg 479conflict
O: -13 - 439 (UniProt: P23004)
PDBExternal DatabaseDetails
Glu 305Gln 319conflict
V: 1 - 274 (UniProt: P13272)
PDBExternal DatabaseDetails
Val 64Leu 64conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains20
Total formula weight558930.2
Non-Polymers*Number of molecules27
Total formula weight14509.5
All*Total formula weight573439.7
*Water molecules are not included.

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PDB entries from 2024-06-12

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