4B52
Crystal structure of Gentlyase, the neutral metalloprotease of Paenibacillus polymyxa
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | BACILLOLYSIN | polymer | 304 | 32407.8 | 2 | UniProt (E3E6L0) Pfam (PF01447) Pfam (PF02868) | PAENIBACILLUS POLYMYXA | GENTLYASE NEUTRAL METALLOPROTEASE |
| 2 | C, I (A, B) | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
| 3 | D, E, F, J, K... (A, B) | CALCIUM ION | non-polymer | 40.1 | 6 | Chemie (CA) | |||
| 4 | G, M (A, B) | N-ALPHA-L-RHAMNOPYRANOSYLOXY(HYDROXYPHOSPHINYL)-L-LEUCYL-L-TRYPTOPHAN | non-polymer | 543.5 | 2 | BIRD (PRD_000638) Chemie (RDF) | |||
| 5 | H (A) | SODIUM ION | non-polymer | 23.0 | 1 | Chemie (NA) | |||
| 6 | N, O (A, B) | water | water | 18.0 | 590 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 304 (UniProt: E3E6L0)
| PDB | External Database | Details |
|---|---|---|
| Thr 12 | Ser 300 | conflict |
| Val 35 | Ile 323 | conflict |
| Thr 68 | Ala 356 | conflict |
| Thr 210 | Arg 498 | conflict |
| Thr 237 | Asn 525 | conflict |
| Gln 283 | Leu 571 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 64815.7 | |
| Non-Polymers* | Number of molecules | 11 |
| Total formula weight | 1481.3 | |
| All* | Total formula weight | 66297.0 |
