4B21
Unprecedented sculpting of DNA at abasic sites by DNA glycosylase homolog Mag2
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | PROBABLE DNA-3-METHYLADENINE GLYCOSYLASE 2 | polymer | 232 | 26362.1 | 1 | UniProt (O94468) Pfam (PF00730) In PDB | SCHIZOSACCHAROMYCES POMBE | MAG2,3-METHYLADENINE DNA GLYCOSIDASE 2,3MEA DNA GLYCOSYLASE 2 |
2 | X | 5'-D(*GP*CP*TP*AP*CP*3DRP*GP*AP*TP*CP*GP)-3' | polymer | 11 | 3225.1 | 1 | SYNTHETIC CONSTRUCT | ||
3 | Y | 5'-D(*CP*GP*AP*TP*CP*GP*GP*TP*AP*GP)-3' | polymer | 10 | 3085.0 | 1 | SYNTHETIC CONSTRUCT | ||
4 | A | beta-D-glucopyranose | non-polymer | 180.2 | 1 | Chemie (BGC) | |||
5 | A, Y | PHOSPHATE ION | non-polymer | 95.0 | 3 | Chemie (PO4) | |||
6 | water | water | 18.0 | 255 | Chemie (HOH) |
Sequence modifications
A: 1 - 213 (UniProt: O94468)
PDB | External Database | Details |
---|---|---|
Met -18 | - | expression tag |
Gly -17 | - | expression tag |
Ser -16 | - | expression tag |
Ser -15 | - | expression tag |
His -14 | - | expression tag |
His -13 | - | expression tag |
His -12 | - | expression tag |
His -11 | - | expression tag |
His -10 | - | expression tag |
Ser -9 | - | expression tag |
Ser -8 | - | expression tag |
Gly -7 | - | expression tag |
Leu -6 | - | expression tag |
Val -5 | - | expression tag |
Pro -4 | - | expression tag |
Arg -3 | - | expression tag |
Gly -2 | - | expression tag |
Ser -1 | - | expression tag |
His 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 3 |
Total formula weight | 32672.2 | |
Non-Polymers* | Number of molecules | 4 |
Total formula weight | 465.1 | |
All* | Total formula weight | 33137.3 |