4ADQ
CRYSTAL STRUCTURE OF THE MOUSE COLONY-STIMULATING FACTOR 1 (MCSF-1) CYTOKINE IN COMPLEX WITH THE VIRAL RECEPTOR BARF1
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C, D | SECRETED PROTEIN BARF1 | polymer | 208 | 23412.7 | 4 | UniProt (P0CW72) Pfam (PF22305) UniProt (by SIFTS) (P03228) In PDB | Human gammaherpesvirus 4 | BARF1,33 KDA EARLY PROTEIN, P33 |
2 | E, F, G, H | MACROPHAGE COLONY-STIMULATING FACTOR 1 | polymer | 153 | 17872.1 | 4 | UniProt (P07141) Pfam (PF05337) In PDB | Mus musculus (house mouse) | CSF-1, M-CSF, MCSF, PROCESSED MACROPHAGE COLONY-STIMULATING FACTOR 1 |
3 | I, K, L | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 3 | In PDB GlyTouCan (G15407YE) | |||
4 | J | alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 748.7 | 1 | In PDB GlyTouCan (G81315DD) |
Sequence modifications
A, B, C, D: 21 - 221 (UniProt: P0CW72)
E, F, G, H: 1 - 149 (UniProt: P07141)
PDB | External Database | Details |
---|---|---|
Lys 222 | - | expression tag |
His 223 | - | expression tag |
His 224 | - | expression tag |
His 225 | - | expression tag |
His 226 | - | expression tag |
His 227 | - | expression tag |
His 228 | - | expression tag |
Ser 169 | Thr 169 | engineered mutation |
PDB | External Database | Details |
---|---|---|
Gly -3 | - | expression tag |
Ser -2 | - | expression tag |
His -1 | - | expression tag |
Met 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 8 |
Total formula weight | 165139.0 | |
Branched | Number of molecules | 4 |
Total formula weight | 2508.3 | |
All* | Total formula weight | 167647.4 |