4AAP
Crystal structure of JMJD5 domain of human Lysine-specific demethylase 8 (KDM8) in complex with N-oxalylglycine (NOG)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B | LYSINE-SPECIFIC DEMETHYLASE 8 | polymer | 239 | 27764.5 | 2 | UniProt (Q8N371) Pfam (PF13621) In PDB | HOMO SAPIENS (HUMAN) | JMJC DOMAIN-CONTAINING PROTEIN 5, JUMONJI DOMAIN-CONTAINING PROTEIN 5 |
| 2 | A, B | ZINC ION | non-polymer | 65.4 | 4 | Chemie (ZN) | |||
| 3 | A, B | N-OXALYLGLYCINE | non-polymer | 147.1 | 2 | Chemie (OGA) | |||
| 4 | water | water | 18.0 | 29 | Chemie (HOH) |
Sequence modifications
A, B: 218 - 454 (UniProt: Q8N371)
| PDB | External Database | Details |
|---|---|---|
| Ser -1 | - | expression tag |
| Met 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 55529.0 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 555.8 | |
| All* | Total formula weight | 56084.8 |
