3U60
Structure of T4 Bacteriophage Clamp Loader Bound To Open Clamp, DNA and ATP Analog
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | B, C, D, E | DNA polymerase accessory protein 44 | polymer | 324 | 36189.6 | 4 | UniProt (P04526) Pfam (PF00004) Pfam (PF21328) Pfam (PF21429) In PDB | Enterobacteria phage T4 | Clamp loader large subunit, Protein Gp44 |
2 | I | Template DNA strand | polymer | 30 | 9172.9 | 1 | |||
3 | J | Primer DNA strand | polymer | 20 | 6136.0 | 1 | |||
4 | A | DNA polymerase accessory protein 62 | polymer | 195 | 22388.7 | 1 | UniProt (P04527) Pfam (PF16790) In PDB | Enterobacteria phage T4 | Clamp loader small subunit, Protein Gp62 |
5 | G, H, F | DNA polymerase processivity component | polymer | 228 | 25162.6 | 3 | UniProt (P04525) Pfam (PF02916) Pfam (PF09116) In PDB | Enterobacteria phage T4 | DNA polymerase accessory protein 45, Gp45 |
6 | B, C, D | [[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-tris(fluoranyl)beryllium | non-polymer | 492.2 | 3 | Chemie (08T) | |||
7 | B, C, D, E | MAGNESIUM ION | non-polymer | 24.3 | 4 | Chemie (MG) | |||
8 | E | ADENOSINE-5'-DIPHOSPHATE | non-polymer | 427.2 | 1 | Chemie (ADP) |
Sequence modifications
B, C, D, E: 1 - 319 (UniProt: P04526)
A: 2 - 187 (UniProt: P04527)
PDB | External Database | Details |
---|---|---|
Gly -4 | - | EXPRESSION TAG |
Pro -3 | - | EXPRESSION TAG |
Gly -2 | - | EXPRESSION TAG |
Gly -1 | - | EXPRESSION TAG |
Ser 0 | - | EXPRESSION TAG |
PDB | External Database | Details |
---|---|---|
Gly 188 | - | EXPRESSION TAG |
Leu 189 | - | EXPRESSION TAG |
Glu 190 | - | EXPRESSION TAG |
His 191 | - | EXPRESSION TAG |
His 192 | - | EXPRESSION TAG |
His 193 | - | EXPRESSION TAG |
His 194 | - | EXPRESSION TAG |
His 195 | - | EXPRESSION TAG |
His 196 | - | EXPRESSION TAG |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 10 |
Total formula weight | 257943.8 | |
Non-Polymers* | Number of molecules | 8 |
Total formula weight | 2001.0 | |
All* | Total formula weight | 259944.8 |