3THP
Crystal structure and RNA binding properties of the RRM/AlkB domains in human ABH8, an enzyme catalyzing tRNA hypermodification, Northeast Structural Genomics Consortium Target HR5601B
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Alkylated DNA repair protein alkB homolog 8 | polymer | 345 | 39687.9 | 1 | UniProt (Q96BT7) Pfam (PF09004) Pfam (PF00076) Pfam (PF13532) | Homo sapiens (human) | Probable alpha-ketoglutarate-dependent dioxygenase ABH8 |
| 2 | B (A) | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
| 3 | C (A) | MANGANESE (II) ION | non-polymer | 54.9 | 1 | Chemie (MN) | |||
| 4 | D (A) | 2-OXOGLUTARIC ACID | non-polymer | 146.1 | 1 | Chemie (AKG) |
Sequence modifications
A: 25 - 355 (UniProt: Q96BT7)
| PDB | External Database | Details |
|---|---|---|
| Asn 356 | - | expression tag |
| Leu 357 | - | expression tag |
| Tyr 358 | - | expression tag |
| Phe 359 | - | expression tag |
| Gln 360 | - | expression tag |
| Gly 361 | - | expression tag |
| Leu 362 | - | expression tag |
| Glu 363 | - | expression tag |
| His 364 | - | expression tag |
| His 365 | - | expression tag |
| His 366 | - | expression tag |
| His 367 | - | expression tag |
| His 368 | - | expression tag |
| His 369 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 39687.9 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 266.4 | |
| All* | Total formula weight | 39954.4 |
