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3THP

Crystal structure and RNA binding properties of the RRM/AlkB domains in human ABH8, an enzyme catalyzing tRNA hypermodification, Northeast Structural Genomics Consortium Target HR5601B

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0003723molecular_functionRNA binding
A0070988biological_processdemethylation
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 401
ChainResidue
AHIS242
ACYS341
ACYS343
ACYS349

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MN A 402
ChainResidue
AHIS238
AASP240
AHIS292
AAKG403

site_idAC3
Number of Residues11
DetailsBINDING SITE FOR RESIDUE AKG A 403
ChainResidue
ATYR229
AHIS238
ASER251
AMSE260
AHIS292
AARG328
ASER330
ATHR332
AARG334
AMN402
AASN227

Functional Information from PROSITE/UniProt
site_idPS00050
Number of Residues16
DetailsRIBOSOMAL_L23 Ribosomal protein L23 signature. KRAYVTLNgkevvddL
ChainResidueDetails
ALYS94-LEU109

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"22065580","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues3
DetailsBinding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU00805","evidenceCode":"ECO:0000255"},{"evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

246704

PDB entries from 2025-12-24

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