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3TG5

Structure of SMYD2 in complex with p53 and SAH

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
N-lysine methyltransferase SMYD2polymer43349760.11UniProt (Q9NRG4)
Pfam (PF00856)
Pfam (PF01753)
Homo sapiens (human)HSKM-B, Histone methyltransferase SMYD2, Lysine N-methyltransferase 3C, SET and MYND domain-containing protein 2
2B
(B)
Cellular tumor antigen p53polymer111241.41UniProt (P04637)Homo sapiensAntigen NY-CO-13, Phosphoprotein p53, Tumor suppressor p53
3C
(A)
GLYCEROLnon-polymer92.11Chemie (GOL)
4D
(A)
S-ADENOSYL-L-HOMOCYSTEINEnon-polymer384.41Chemie (SAH)
5E, F, G
(A)
ZINC IONnon-polymer65.43Chemie (ZN)
6H, I
(A, B)
waterwater18.0209Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight51001.5
Non-Polymers*Number of molecules5
Total formula weight672.7
All*Total formula weight51674.3
*Water molecules are not included.

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PDB entries from 2025-12-17

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