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3RTV

Crystal structure of the large fragment of DNA polymerase I from Thermus Aquaticus in a closed ternary complex with natural primer/template DNA

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
DNA polymerase I, thermostablepolymer54060937.01UniProt (P19821)
Pfam (PF09281)
Pfam (PF00476)
Thermus aquaticusTaq polymerase 1
2B
(B)
(5'-D(*GP*AP*CP*CP*AP*CP*GP*GP*CP*GP*CP*(DDG))-3')polymer123657.41
3C
(C)
(5'-D(*AP*AP*AP*GP*CP*GP*CP*GP*CP*CP*GP*TP*GP*GP*TP*C)-3')polymer164924.21
4D
(A)
2'-DEOXYCYTIDINE-5'-TRIPHOSPHATEnon-polymer467.21Chemie (DCP)
5E, F, O
(A, B)
MAGNESIUM IONnon-polymer24.33Chemie (MG)
6G, H, I, J, N...
(A, C)
GLYCEROLnon-polymer92.16Chemie (GOL)
7K, L, M
(A)
ACETATE IONnon-polymer59.03Chemie (ACT)
8Q, R, S
(A, B, C)
waterwater18.0331Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight69518.6
Non-Polymers*Number of molecules13
Total formula weight1269.8
All*Total formula weight70788.3
*Water molecules are not included.

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PDB entries from 2025-12-24

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