Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0001882 | molecular_function | nucleoside binding |
A | 0003676 | molecular_function | nucleic acid binding |
A | 0003677 | molecular_function | DNA binding |
A | 0003887 | molecular_function | DNA-directed DNA polymerase activity |
A | 0006260 | biological_process | DNA replication |
A | 0006261 | biological_process | DNA-templated DNA replication |
A | 0006281 | biological_process | DNA repair |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 23 |
Details | BINDING SITE FOR RESIDUE DCP A 1 |
Chain | Residue |
A | MG2 |
A | GLN613 |
A | ILE614 |
A | GLU615 |
A | HIS639 |
A | ARG659 |
A | LYS663 |
A | PHE667 |
A | ASP785 |
A | MG833 |
A | HOH841 |
A | HOH6 |
A | HOH842 |
B | HOH19 |
B | DDG112 |
C | DG204 |
A | HOH30 |
A | HOH188 |
A | HOH204 |
A | ARG573 |
A | ASP610 |
A | TYR611 |
A | SER612 |
site_id | AC2 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MG A 833 |
Chain | Residue |
A | DCP1 |
A | MG2 |
A | ASP610 |
A | TYR611 |
A | ASP785 |
site_id | AC3 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE MG A 2 |
Chain | Residue |
A | DCP1 |
A | ASP610 |
A | ASP785 |
A | MG833 |
A | HOH840 |
A | HOH842 |
B | DDG112 |
site_id | AC4 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE GOL A 834 |
Chain | Residue |
A | ARG313 |
A | TRP318 |
site_id | AC5 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE GOL A 3 |
Chain | Residue |
A | HOH41 |
A | ARG425 |
A | TRP428 |
A | TYR811 |
site_id | AC6 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE GOL A 4 |
Chain | Residue |
A | HOH190 |
A | THR544 |
A | TYR545 |
A | PRO579 |
A | ASN580 |
A | ASN583 |
C | DC209 |
C | DC210 |
site_id | AC7 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE GOL A 5 |
Chain | Residue |
A | HOH282 |
A | ASP452 |
A | TYR455 |
A | ARG596 |
A | ARG596 |
A | ASP826 |
A | HOH854 |
site_id | AC8 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE ACT A 835 |
Chain | Residue |
A | HOH175 |
A | HOH225 |
A | GLU462 |
A | GLU466 |
A | ARG593 |
A | GLU825 |
site_id | AC9 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE ACT A 836 |
site_id | BC1 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ACT A 837 |
Chain | Residue |
A | ASP371 |
A | TRP417 |
A | ARG431 |
A | ARG435 |
site_id | BC2 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE GOL A 838 |
Chain | Residue |
A | LEU711 |
A | GLU742 |
A | GLU745 |
A | ARG746 |
A | PHE749 |
C | HOH323 |
site_id | BC3 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MG B 1 |
Chain | Residue |
B | HOH60 |
B | HOH66 |
B | HOH174 |
B | HOH255 |
C | HOH285 |
site_id | BC4 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE GOL C 1 |
Chain | Residue |
A | ALA570 |
A | ARG728 |
C | HOH164 |
C | DG206 |
C | DC207 |
Functional Information from PROSITE/UniProt
site_id | PS00447 |
Number of Residues | 20 |
Details | DNA_POLYMERASE_A DNA polymerase family A signature. RraAKtinFGvlYgmSahrL |
Chain | Residue | Details |
A | ARG659-LEU678 | |