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3PYY

Discovery and Characterization of a Cell-Permeable, Small-molecule c-Abl Kinase Activator that Binds to the Myristoyl Binding Site

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Tyrosine-protein kinase ABL1polymer29834708.62UniProt (P00519)
Pfam (PF07714)
Homo sapiens (human)Abelson murine leukemia viral oncogene homolog 1,Abelson tyrosine-protein kinase 1,Proto-oncogene c-Abl,p150
2C, D, G
(A, B)
SULFATE IONnon-polymer96.13Chemie (SO4)
3E, H
(A, B)
4-(4-METHYL-PIPERAZIN-1-YLMETHYL)-N-[4-METHYL-3-(4-PYRIDIN-3-YL-PYRIMIDIN-2-YLAMINO)-PHENYL]-BENZAMIDEnon-polymer493.62Chemie (STI)
4F, K
(A, B)
(5R)-5-[3-(4-fluorophenyl)-1-phenyl-1H-pyrazol-4-yl]imidazolidine-2,4-dionenon-polymer336.32Chemie (3YY)
5I
(B)
NONAETHYLENE GLYCOLnon-polymer414.51Chemie (2PE)
6J
(B)
GLYCEROLnon-polymer92.11Chemie (GOL)
7L, M
(A, B)
waterwater18.0215Chemie (HOH)
Sequence modifications
A, B: 248 - 531 (UniProt: P00519)
PDBExternal DatabaseDetails
Met 234-expression tag
His 235-expression tag
His 236-expression tag
His 237-expression tag
His 238-expression tag
His 239-expression tag
His 240-expression tag
Glu 241-expression tag
Asn 242-expression tag
Leu 243-expression tag
Tyr 244-expression tag
Phe 245-expression tag
Gln 246-expression tag
Gly 247-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight69417.1
Non-Polymers*Number of molecules9
Total formula weight2454.6
All*Total formula weight71871.7
*Water molecules are not included.

246031

PDB entries from 2025-12-10

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