3O4L
Genetic and structural basis for selection of a ubiquitous T cell receptor deployed in Epstein-Barr virus
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | MHC class I antigen | polymer | 276 | 31951.3 | 1 | UniProt (Q8WLS4) Pfam (PF00129) Pfam (PF07654) | Homo sapiens (human) | |
| 2 | B (B) | Beta-2-microglobulin | polymer | 100 | 11853.3 | 1 | UniProt (P61769) Pfam (PF07654) | Homo sapiens (human) | Beta-2-microglobulin form pI 5.3 |
| 3 | C (C) | BSLF2/BMLF1 protein | polymer | 9 | 920.2 | 1 | UniProt (A7UMS0) UniProt (by SIFTS) (Q3KSU1) | Human herpesvirus 4 (Epstein-Barr virus EBV) | |
| 4 | D (D) | T-CELL RECEPTOR, ALPHA CHAIN | polymer | 195 | 21960.4 | 1 | Pfam (PF09291) UniProt (by SIFTS) (P01848) | Homo sapiens (human) | |
| 5 | E (E) | T-CELL RECEPTOR, BETA CHAIN | polymer | 245 | 27412.5 | 1 | Pfam (PF07654) UniProt (by SIFTS) (P01850) | Homo sapiens (human) | |
| 6 | F, G, H, L, O... (A, B, D, E) | GLYCEROL | non-polymer | 92.1 | 11 | Chemie (GOL) | |||
| 7 | I, J, M, N, V... (A, B, E) | SULFATE ION | non-polymer | 96.1 | 7 | Chemie (SO4) | |||
| 8 | K (B) | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID | non-polymer | 195.2 | 1 | Chemie (MES) | |||
| 9 | AA, BA, CA, Y, Z (C, D, E, A, B) | water | water | 18.0 | 334 | Chemie (HOH) |
Sequence modifications
B: 1 - 99 (UniProt: P61769)
| PDB | External Database | Details |
|---|---|---|
| Met 0 | - | expression tag |
| Cys 91 | Lys 111 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 5 |
| Total formula weight | 94097.8 | |
| Non-Polymers* | Number of molecules | 19 |
| Total formula weight | 1880.7 | |
| All* | Total formula weight | 95978.5 |
