3O4L
Genetic and structural basis for selection of a ubiquitous T cell receptor deployed in Epstein-Barr virus
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-11-27 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.976 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 94.080, 122.500, 82.370 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 61.250 - 2.540 |
R-factor | 0.2245 |
Rwork | 0.221 |
R-free | 0.29620 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2p5e |
RMSD bond length | 0.017 |
RMSD bond angle | 1.233 |
Data reduction software | xia2 |
Data scaling software | SCALA (3.3.15) |
Phasing software | AMoRE |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 61.250 | 61.250 | 2.610 |
High resolution limit [Å] | 2.540 | 11.360 | 2.540 |
Rmerge | 0.035 | 0.832 | |
Total number of observations | 2820 | 17505 | |
Number of reflections | 31817 | ||
<I/σ(I)> | 12.2 | 16.6 | 0.9 |
Completeness [%] | 99.1 | 98.6 | 95.1 |
Redundancy | 7.9 | 6.7 | 7.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 291 | 0.16 M Ca Acetate, 0.08 M Na Cacodylate, 12.5% PEG 8000, 20% Glycerol, pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 291K |