3NVK
Structural basis for substrate placement by an archaeal box C/D ribonucleoprotein particle
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, F | NOP5/NOP56 related protein | polymer | 376 | 43470.1 | 2 | UniProt (Q8U4M1) Pfam (PF21572) Pfam (PF01798) In PDB | Pyrococcus furiosus | |
2 | E, H | 50S ribosomal protein L7Ae | polymer | 129 | 14243.5 | 2 | UniProt (Q8U160) Pfam (PF01248) In PDB | Pyrococcus furiosus | |
3 | I, J | Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase | polymer | 234 | 26760.8 | 2 | UniProt (Q8U4M2) Pfam (PF01269) In PDB | Pyrococcus furiosus | |
4 | K, L | RNA (5'-R(*GP*CP*CP*GP*UP*UP*GP*AP*AP*GP*CP*UP*CP*UP*GP*AP*CP*CP*GP*AP*AP*AP*GP*GP*CP*GP*UP*GP*AP*UP*GP*AP*GP*C)-3') | polymer | 34 | 11009.6 | 2 | |||
5 | G, S | RNA (5'-R(*GP*AP*GP*CP*UP*UP*CP*AP*AP*CP*GP*GP*C)-3') | polymer | 13 | 4156.5 | 2 | |||
6 | I, J | S-ADENOSYLMETHIONINE | non-polymer | 398.4 | 2 | Chemie (SAM) |
Sequence modifications
A, F: 5 - 367 (UniProt: Q8U4M1)
E, H: 3 - 124 (UniProt: Q8U160)
I, J: 1 - 227 (UniProt: Q8U4M2)
PDB | External Database | Details |
---|---|---|
Met -5 | - | expression tag |
His -4 | - | expression tag |
His -3 | - | expression tag |
His -2 | - | expression tag |
His -1 | - | expression tag |
His 0 | - | expression tag |
His 1 | - | expression tag |
Val 2 | - | expression tag |
Met 3 | - | expression tag |
Ile 4 | - | expression tag |
Leu 368 | - | expression tag |
Val 369 | - | expression tag |
Leu 370 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Met -4 | - | expression tag |
His -3 | - | expression tag |
His -2 | - | expression tag |
His -1 | - | expression tag |
His 0 | - | expression tag |
His 1 | - | expression tag |
His 2 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Met -6 | - | expression tag |
His -5 | - | expression tag |
His -4 | - | expression tag |
His -3 | - | expression tag |
His -2 | - | expression tag |
His -1 | - | expression tag |
His 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 10 |
Total formula weight | 199281.2 | |
Non-Polymers* | Number of molecules | 2 |
Total formula weight | 796.9 | |
All* | Total formula weight | 200078.1 |