3NVK

Structural basis for substrate placement by an archaeal box C/D ribonucleoprotein particle

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0005515	molecular_function	protein binding
A	0030515	molecular_function	snoRNA binding
A	0031428	cellular_component	box C/D methylation guide snoRNP complex
A	0032040	cellular_component	small-subunit processome
E	0001682	biological_process	tRNA 5'-leader removal
E	0003723	molecular_function	RNA binding
E	0003735	molecular_function	structural constituent of ribosome
E	0004526	molecular_function	ribonuclease P activity
E	0005737	cellular_component	cytoplasm
E	0005840	cellular_component	ribosome
E	0006364	biological_process	rRNA processing
E	0006412	biological_process	translation
E	0008033	biological_process	tRNA processing
E	0019843	molecular_function	rRNA binding
E	0042254	biological_process	ribosome biogenesis
E	1990904	cellular_component	ribonucleoprotein complex
F	0005515	molecular_function	protein binding
F	0030515	molecular_function	snoRNA binding
F	0031428	cellular_component	box C/D methylation guide snoRNP complex
F	0032040	cellular_component	small-subunit processome
H	0001682	biological_process	tRNA 5'-leader removal
H	0003723	molecular_function	RNA binding
H	0003735	molecular_function	structural constituent of ribosome
H	0004526	molecular_function	ribonuclease P activity
H	0005737	cellular_component	cytoplasm
H	0005840	cellular_component	ribosome
H	0006364	biological_process	rRNA processing
H	0006412	biological_process	translation
H	0008033	biological_process	tRNA processing
H	0019843	molecular_function	rRNA binding
H	0042254	biological_process	ribosome biogenesis
H	1990904	cellular_component	ribonucleoprotein complex
I	0000494	biological_process	box C/D sno(s)RNA 3'-end processing
I	0003723	molecular_function	RNA binding
I	0005515	molecular_function	protein binding
I	0006338	biological_process	chromatin remodeling
I	0006364	biological_process	rRNA processing
I	0008033	biological_process	tRNA processing
I	0008168	molecular_function	methyltransferase activity
I	0008649	molecular_function	rRNA methyltransferase activity
I	0016740	molecular_function	transferase activity
I	0031167	biological_process	rRNA methylation
I	0032259	biological_process	methylation
I	1990259	molecular_function	histone H2AQ104 methyltransferase activity
J	0000494	biological_process	box C/D sno(s)RNA 3'-end processing
J	0003723	molecular_function	RNA binding
J	0005515	molecular_function	protein binding
J	0006338	biological_process	chromatin remodeling
J	0006364	biological_process	rRNA processing
J	0008033	biological_process	tRNA processing
J	0008168	molecular_function	methyltransferase activity
J	0008649	molecular_function	rRNA methyltransferase activity
J	0016740	molecular_function	transferase activity
J	0031167	biological_process	rRNA methylation
J	0032259	biological_process	methylation
J	1990259	molecular_function	histone H2AQ104 methyltransferase activity

Functional Information from PDB Data

site_id	AC1
Number of Residues	15
Details	BINDING SITE FOR RESIDUE SAM I 228

Chain	Residue
A	GLU352
I	ASP130
I	ALA131
I	ASP150
I	VAL151
I	GLN153
I	GLU216
A	TYR353
I	LYS57
I	GLY81
I	ALA83
I	ILE104
I	GLU105
I	PHE106
I	GLY129

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site_id	AC2
Number of Residues	12
Details	BINDING SITE FOR RESIDUE SAM J 228

Chain	Residue
F	GLU352
F	TYR353
J	LYS57
J	GLY81
J	ALA83
J	GLU105
J	PHE106
J	ASP130
J	ALA131
J	ASP150
J	VAL151
J	GLN153

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Functional Information from PROSITE/UniProt

site_id	PS00566
Number of Residues	15
Details	FIBRILLARIN Fibrillarin signature. GKIYGIEFSpRvlRE

Chain	Residue	Details
I	GLY99-GLU113

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site_id	PS01082
Number of Residues	18
Details	RIBOSOMAL_L7AE Ribosomal protein L7Ae signature. CeekeIPYiyVpSKkeLG

Chain	Residue	Details
E	CYS71-GLY88

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Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	2
Details	Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_00351","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

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site_id	SWS_FT_FI2
Number of Residues	10
Details	Binding site: {}

Chain

Residue

Details

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