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3MTN

Usp21 in complex with a ubiquitin-based, USP21-specific inhibitor

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, C
(A, C)
Ubiquitin carboxyl-terminal hydrolase 21polymer37341981.72UniProt (Q9UK80)
Pfam (PF00443)
Homo sapiens (human)Ubiquitin thioesterase 21, Ubiquitin-specific-processing protease 21, Deubiquitinating enzyme 21
2B, D
(B, D)
UBIQUITIN VARIANT UBV.21.4polymer859311.62UniProt (P62988)
Pfam (PF00240)
UniProt (by SIFTS) (P0CG48)
Homo sapiens (Human)UBA80, UBCEP1
3E, J
(A, C)
ZINC IONnon-polymer65.42Chemie (ZN)
4F, G, I, K
(A, C)
CHLORIDE IONnon-polymer35.54Chemie (CL)
5H, L
(A, C)
GLYCEROLnon-polymer92.12Chemie (GOL)
6M, N, O, P
(A, B, C, D)
waterwater18.043Chemie (HOH)
Sequence modifications
A, C: 209 - 562 (UniProt: Q9UK80)
PDBExternal DatabaseDetails
Met 190-expression tag
Gly 191-expression tag
Ser 192-expression tag
Ser 193-expression tag
His 194-expression tag
His 195-expression tag
His 196-expression tag
His 197-expression tag
His 198-expression tag
His 199-expression tag
Ser 200-expression tag
Ser 201-expression tag
Gly 202-expression tag
Leu 203-expression tag
Val 204-expression tag
Pro 205-expression tag
Arg 206-expression tag
Gly 207-expression tag
Ser 208-expression tag
B, D: 1 - 76 (UniProt: P62988)
PDBExternal DatabaseDetails
Gly -2-expression tag
Ser -1-expression tag
His 0-expression tag
Trp 64Glu 64engineered mutation
Phe 68His 68engineered mutation
Leu 70Val 70engineered mutation
Gly 77-expression tag
Gly 78-expression tag
Gly 79-expression tag
Gly 80-expression tag
Ser 81-expression tag
Gly 82-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight102586.5
Non-Polymers*Number of molecules8
Total formula weight456.8
All*Total formula weight103043.3
*Water molecules are not included.

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PDB entries from 2025-06-18

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