3MHS
Structure of the SAGA Ubp8/Sgf11/Sus1/Sgf73 DUB module bound to ubiquitin aldehyde
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Ubiquitin carboxyl-terminal hydrolase 8 | polymer | 476 | 54033.6 | 1 | UniProt (P50102) Pfam (PF02148) Pfam (PF00443) | Saccharomyces cerevisiae (brewer's yeast lager beer yeast yeast) | Ubiquitin thioesterase 8, Ubiquitin-specific-processing protease 8, Deubiquitinating enzyme 8 |
| 2 | B (B) | Protein SUS1 | polymer | 96 | 11094.5 | 1 | UniProt (Q6WNK7) Pfam (PF10163) | Saccharomyces cerevisiae (brewer's yeast lager beer yeast yeast) | |
| 3 | C (C) | SAGA-associated factor 11 | polymer | 99 | 11297.6 | 1 | UniProt (Q03067) Pfam (PF18519) Pfam (PF08209) | Saccharomyces cerevisiae (brewer's yeast lager beer yeast yeast) | 11 kDa SAGA-associated factor |
| 4 | D (D) | Ubiquitin | polymer | 76 | 8560.8 | 1 | UniProt (P62988) Pfam (PF00240) UniProt (by SIFTS) (P0CG48) | Homo sapiens (human) | |
| 5 | E (E) | SAGA-associated factor 73 | polymer | 96 | 10824.3 | 1 | UniProt (P53165) Pfam (PF18508) | Saccharomyces cerevisiae (brewer's yeast lager beer yeast yeast) | 73 kDa SAGA-associated factor, SAGA histone acetyltransferase complex 73 kDa subunit |
| 6 | F (A) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 1 | Chemie (EDO) | |||
| 7 | G (A) | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) | |||
| 8 | H, I, J, K, L... (A, C, E) | ZINC ION | non-polymer | 65.4 | 8 | Chemie (ZN) | |||
| 9 | P, Q, R, S, T (A, B, C, D, E) | water | water | 18.0 | 845 | Chemie (HOH) |
Sequence modifications
A: 1 - 471 (UniProt: P50102)
| PDB | External Database | Details |
|---|---|---|
| Gly -4 | - | expression tag |
| Ala -3 | - | expression tag |
| Ala -2 | - | expression tag |
| Ala -1 | - | expression tag |
| Ala 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 5 |
| Total formula weight | 95810.9 | |
| Non-Polymers* | Number of molecules | 10 |
| Total formula weight | 677.4 | |
| All* | Total formula weight | 96488.3 |
