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3M4C

A Zn-mediated tetrahedral protein lattice cage encapsulating a microperoxidase

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D
(A, B, C, D)
Soluble cytochrome b562polymer10611645.14UniProt (P0ABE7)
Pfam (PF07361)
Escherichia coliCytochrome b-562
2E
(E)
Heme-Peptide Fragmentpolymer91007.11synthetic constructHeme-Peptide Fragment
3F, K, R, T, X
(A, B, C, D, E)
PROTOPORPHYRIN IX CONTAINING FEnon-polymer616.55Chemie (HEM)
4G, L, S, U
(A, B, D)
ACETATE IONnon-polymer59.04Chemie (ACT)
5H, I, J, M, N...
(A, B, D)
ZINC IONnon-polymer65.410Chemie (ZN)
6AA, BA, CA, Y, Z
(C, D, E, A, B)
waterwater18.0439Chemie (HOH)
Sequence modifications
A, B, C, D: 1 - 106 (UniProt: P0ABE7)
PDBExternal DatabaseDetails
Ala 34Arg 56engineered mutation
Ala 38Leu 60engineered mutation
Trp 41Gln 63engineered mutation
Ser 42Lys 64engineered mutation
His 59Lys 81engineered mutation
Trp 66Asp 88engineered mutation
Cys 67Ile 89engineered mutation
Ile 69Val 91engineered mutation
His 73Asp 95engineered mutation
Ala 74Asp 96engineered mutation
His 77Lys 99engineered mutation
Cys 98Arg 120engineered mutation
Cys 101Tyr 123engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains5
Total formula weight47587.4
Non-Polymers*Number of molecules19
Total formula weight3972.7
All*Total formula weight51560.1
*Water molecules are not included.

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PDB entries from 2024-11-13

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