3LJZ
Crystal Structure of Human MMP-13 complexed with an Amino-2-indanol compound
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (A, B, C, D) | Collagenase 3 | polymer | 164 | 18418.6 | 4 | UniProt (P45452) Pfam (PF00413) | Homo sapiens (human) | Matrix metalloproteinase-13, MMP-13 |
| 2 | BA, CA, E, F, L... (D, A, B, C) | CALCIUM ION | non-polymer | 40.1 | 8 | Chemie (CA) | |||
| 3 | DA, EA, G, H, N... (D, A, B, C) | ZINC ION | non-polymer | 65.4 | 8 | Chemie (ZN) | |||
| 4 | HA, I, IA, J, JA... (D, A, B, C) | SULFATE ION | non-polymer | 96.1 | 9 | Chemie (SO4) | |||
| 5 | AA, K, KA, S (C, A, D, B) | (2R)-2-[4-(1,3-benzodioxol-5-yl)benzyl]-N~4~-hydroxy-N~1~-[(1S,2R)-2-hydroxy-2,3-dihydro-1H-inden-1-yl]butanediamide | non-polymer | 474.5 | 4 | Chemie (LA3) | |||
| 6 | FA, GA, P, X (D, B, C) | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID | non-polymer | 238.3 | 4 | Chemie (EPE) | |||
| 7 | LA, MA, NA, OA (A, B, C, D) | water | water | 18.0 | 345 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 105 - 267 (UniProt: P45452)
| PDB | External Database | Details |
|---|---|---|
| Ala 104 | Tyr | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 73674.4 | |
| Non-Polymers* | Number of molecules | 33 |
| Total formula weight | 4559.7 | |
| All* | Total formula weight | 78234.1 |
