3LDB
Structure of JMJD6 complexd with ALPHA-KETOGLUTARATE and Fab Fragment.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 | polymer | 334 | 39437.7 | 1 | UniProt (Q6NYC1) Pfam (PF02373) | Homo sapiens (human) | Histone arginine demethylase JMJD6, Peptide-lysine 5-dioxygenase JMJD6, Lysyl-hydroxylase JMJD6, JmjC domain-containing protein 6, Jumonji domain-containing protein 6, Phosphatidylserine receptor, Protein PTDSR |
| 2 | B (B) | antibody Fab fragment light chain | polymer | 220 | 24100.0 | 1 | Cricetulus migratorius | ||
| 3 | C (C) | antibody Fab fragment heavy chain | polymer | 221 | 24007.7 | 1 | Cricetulus migratorius | ||
| 4 | D, E, F, G, Y (A, B) | GLYCEROL | non-polymer | 92.1 | 5 | Chemie (GOL) | |||
| 5 | AA, BA, CA, DA, EA... (B, C, A) | SULFATE ION | non-polymer | 96.1 | 19 | Chemie (SO4) | |||
| 6 | U (A) | 2-OXOGLUTARIC ACID | non-polymer | 146.1 | 1 | Chemie (AKG) | |||
| 7 | V (A) | FE (III) ION | non-polymer | 55.8 | 1 | Chemie (FE) | |||
| 8 | W, X (A) | MERCURY (II) ION | non-polymer | 200.6 | 2 | Chemie (HG) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 87545.4 | |
| Non-Polymers* | Number of molecules | 28 |
| Total formula weight | 2888.8 | |
| All* | Total formula weight | 90434.2 |
