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3LDB

Structure of JMJD6 complexd with ALPHA-KETOGLUTARATE and Fab Fragment.

Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL A 335
ChainResidue
AASP50
AGLN53
AGLU58
AARG62
CSER54

site_idAC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE GOL A 336
ChainResidue
AASP279
ATHR280

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL A 337
ChainResidue
ALYS6
AILE9
AGLU119
ASER123
AMET1
ASER5

site_idAC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE GOL A 338
ChainResidue
AARG95
AASN96
ALYS115

site_idAC5
Number of Residues2
DetailsBINDING SITE FOR RESIDUE GOL B 221
ChainResidue
AGLU334
BARG114

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 339
ChainResidue
AASN237
APRO241
CSER31
CASN53
CTYR100

site_idAC7
Number of Residues1
DetailsBINDING SITE FOR RESIDUE SO4 C 222
ChainResidue
CARG71

site_idAC8
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 340
ChainResidue
AASN96
AGLN97
ALYS142

site_idAC9
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 341
ChainResidue
ASER109
ALYS111
ASER136

site_idBC1
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 A 342
ChainResidue
ALEU147
AARG173

site_idBC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 343
ChainResidue
ATHR221
AARG222
AGLN229

site_idBC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 B 222
ChainResidue
BGLN48
BSER49
BLYS51
CGLN110

site_idBC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 344
ChainResidue
AGLN97
AHIS140
ALYS142
AARG143

site_idBC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 345
ChainResidue
AARG8
ALYS113
ALYS115
ATYR116

site_idBC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 346
ChainResidue
AGLY165
AGLU166
ALYS167
AARG168

site_idBC7
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 347
ChainResidue
APRO190
ALEU191
ALYS300

site_idBC8
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 A 348
ChainResidue
AARG215
AGLU216

site_idBC9
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 A 349
ChainResidue
AARG310
AARG314

site_idCC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 350
ChainResidue
AARG305
APRO306
ALYS307
ALEU308

site_idCC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 B 223
ChainResidue
BLYS18
BTHR20
BSER71
BGLY72
BASP76
BTHR78
BTHR80

site_idCC3
Number of Residues10
DetailsBINDING SITE FOR RESIDUE SO4 C 223
ChainResidue
BLEU166
BGLN167
BSER168
BSER182
BTHR184
CPRO174
CVAL176
CSER183
CLEU184
CSER185

site_idCC4
Number of Residues1
DetailsBINDING SITE FOR RESIDUE SO4 C 224
ChainResidue
CGLN81

site_idCC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 351
ChainResidue
ATYR313
AASP328
AASP331

site_idCC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 B 224
ChainResidue
BGLN43
BLYS51
BLEU53
BPRO65

site_idCC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE AKG A 600
ChainResidue
ATRP174
ATHR184
AASN197
ATHR285
AFE601

site_idCC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE FE A 601
ChainResidue
AHIS187
AASP189
AHIS273
AAKG600

site_idCC9
Number of Residues2
DetailsBINDING SITE FOR RESIDUE HG A 352
ChainResidue
ATRP206
ACYS207

site_idDC1
Number of Residues2
DetailsBINDING SITE FOR RESIDUE HG A 353
ChainResidue
AMET112
ACYS101

Functional Information from PROSITE/UniProt
site_idPS00290
Number of Residues7
DetailsIG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YTCEVTH
ChainResidueDetails
BTYR198-HIS204

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
ATHR184
ALYS204

site_idSWS_FT_FI2
Number of Residues5
DetailsBINDING: BINDING => ECO:0000269|PubMed:20679243
ChainResidueDetails
AHIS187
AASP189
AASN197
AHIS273
ATHR285

site_idSWS_FT_FI3
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:23186163
ChainResidueDetails
ASER38

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PDB entries from 2024-07-24

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