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3L8B

Crystal structure of a replicative DNA polymerase bound to the oxidized guanine lesion guanidinohydantoin

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
DNA polymerasepolymer906105069.62UniProt (Q38087)
Pfam (PF03104)
Pfam (PF00136)
Enterobacteria phage RB69 (Bacteriophage RB69)Gp43
2C, E
(C, E)
DNA (5'-D(*AP*C*TP*(G35)P*TP*TP*AP*AP*GP*CP*AP*GP*TP*CP*CP*GP*CP*G)-3')polymer185522.62
3D, F
(D, F)
DNA (5'-D(*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*A)-3')polymer133991.62
4G, H
(B)
SULFATE IONnon-polymer96.12Chemie (SO4)
5I, J, K, L, M...
(A, B, C, D, E...)
waterwater18.0998Chemie (HOH)
Sequence modifications
A, B: 1 - 903 (UniProt: Q38087)
PDBExternal DatabaseDetails
Ala 222Asp 222engineered mutation
Ala 327Asp 327engineered mutation
His 904-expression tag
His 905-expression tag
His 906-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight229167.6
Non-Polymers*Number of molecules2
Total formula weight192.1
All*Total formula weight229359.7
*Water molecules are not included.

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PDB entries from 2025-12-10

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