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3JWQ

Crystal structure of chimeric PDE5/PDE6 catalytic domain complexed with sildenafil

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D
(A, B, C, D)
cGMP-specific 3',5'-cyclic phosphodiesterase catalytic domain, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha chimerapolymer33038282.14UniProt (O76074)
UniProt (P51160)
Pfam (PF00233)
Homo sapiens (human)cGMP-binding cGMP-specific phosphodiesterase, CGB-PDE, cGMP phosphodiesterase 6C
2E, H, K, N
(A, B, C, D)
ZINC IONnon-polymer65.44Chemie (ZN)
3F, I, L, O
(A, B, C, D)
MAGNESIUM IONnon-polymer24.34Chemie (MG)
4G, J, M, P
(A, B, C, D)
5-{2-ETHOXY-5-[(4-METHYLPIPERAZIN-1-YL)SULFONYL]PHENYL}-1-METHYL-3-PROPYL-1H,6H,7H-PYRAZOLO[4,3-D]PYRIMIDIN-7-ONEnon-polymer474.64Chemie (VIA)
5Q, R, S, T
(A, B, C, D)
waterwater18.013Chemie (HOH)
Sequence modifications
A, B, C, D: 535 - 786 (UniProt: O76074)
PDBExternal DatabaseDetails
Gly 531-expression tag
Ser 532-expression tag
His 533-expression tag
Met 534-expression tag
A, B, C, D: 787 - 826 (UniProt: P51160)
A, B, C, D: 827 - 860 (UniProt: O76074)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight153128.3
Non-Polymers*Number of molecules12
Total formula weight2257.2
All*Total formula weight155385.5
*Water molecules are not included.

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PDB entries from 2025-07-30

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