3JAJ
Structure of the engaged state of the mammalian SRP-ribosome complex
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A | Ribosomal protein uL2 | polymer | 244 | 26570.1 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 2 | D | Ribosomal protein uL18 | polymer | 292 | 33942.2 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 3 | G | Ribosomal protein eL8 | polymer | 238 | 27258.2 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 4 | H | Ribosomal protein uL6 | polymer | 190 | 21655.3 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 5 | J | Ribosomal protein uL5 | polymer | 170 | 19359.4 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 6 | L | Ribosomal protein eL13 | polymer | 210 | 24234.6 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 7 | M | Ribosomal protein eL14 | polymer | 138 | 16129.3 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 8 | N | Ribosomal protein eL15 | polymer | 203 | 24076.1 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 9 | O | Ribosomal protein uL13 | polymer | 201 | 23435.1 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 10 | Q | Ribosomal protein eL18 | polymer | 187 | 21457.4 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 11 | R | Ribosomal protein eL19 | polymer | 180 | 21613.0 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 12 | S | Ribosomal protein eL20 | polymer | 175 | 20696.4 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 13 | T | Ribosomal protein eL21 | polymer | 159 | 18478.8 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 14 | U | Ribosomal protein eL22 | polymer | 99 | 11481.2 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 15 | V | Ribosomal protein uL14 | polymer | 131 | 13972.4 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 16 | X | Ribosomal protein uL23 | polymer | 119 | 13856.4 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 17 | Y | Ribosomal protein uL24 | polymer | 134 | 15891.8 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 18 | Z | Ribosomal protein eL27 | polymer | 135 | 15704.6 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 19 | a | Ribosomal protein uL15 | polymer | 147 | 16503.4 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 20 | b | Ribosomal protein eL29 | polymer | 75 | 8722.3 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 21 | c | Ribosomal protein eL30 | polymer | 94 | 10496.4 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 22 | d | Ribosomal protein eL31 | polymer | 107 | 12635.7 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 23 | e | Ribosomal protein eL32 | polymer | 128 | 15022.0 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 24 | f | Ribosomal protein eL33 | polymer | 109 | 12433.5 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 25 | g | Ribosomal protein eL34 | polymer | 114 | 12994.6 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 26 | h | Ribosomal protein uL29 | polymer | 122 | 14460.5 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 27 | i | Ribosomal protein eL36 | polymer | 102 | 11915.4 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 28 | k | Ribosomal protein eL38 | polymer | 69 | 8107.8 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 29 | l | Ribosomal protein eL39 | polymer | 50 | 6295.6 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 30 | m | Ribosomal protein eL40 | polymer | 52 | 6199.6 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 31 | o | Ribosomal protein eL42 | polymer | 104 | 12198.6 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 32 | 5 | 28S ribosomal RNA | polymer | 3658 | 1185357.6 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 33 | 7 | 5S ribosomal RNA | polymer | 120 | 38691.9 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 34 | 8 | 5.8S ribosomal RNA | polymer | 156 | 50143.6 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 35 | B | Ribosomal protein uL3 | polymer | 394 | 44759.4 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 36 | C | Ribosomal protein uL4 | polymer | 367 | 41635.1 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 37 | E | Ribosomal protein eL6 | polymer | 236 | 27052.2 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 38 | F | Ribosomal protein uL30 | polymer | 225 | 26590.7 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 39 | I | Ribosomal protein uL16 | polymer | 213 | 24465.8 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 40 | P | Ribosomal protein uL22 | polymer | 153 | 17757.6 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 41 | W | Ribosomal protein eL24 | polymer | 63 | 7512.8 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 42 | j | Ribosomal protein eL37 | polymer | 86 | 10102.9 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 43 | n | Ribosomal protein eL41 | polymer | 23 | 3213.1 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 44 | p | Ribosomal protein eL43 | polymer | 91 | 10168.2 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 45 | r | Ribosomal protein eL28 | polymer | 125 | 14301.8 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 46 | K | Ribosomal protein uL11 | polymer | 163 | 17689.5 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 47 | q | Ribosomal protein uL10 | polymer | 202 | 22217.8 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 48 | z | SRP54 | polymer | 426 | 46695.1 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 49 | 2 | Nascent chain | polymer | 31 | 3359.5 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 50 | 3 | Val tRNA | polymer | 76 | 24437.5 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 51 | 4 | SRP 7S RNA | polymer | 206 | 66779.7 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 52 | 9 | SRP19 | polymer | 105 | 12159.2 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 53 | 6 | SRP68 | polymer | 179 | 21324.4 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 54 | S2 | 18S ribosomal RNA | polymer | 1742 | 561958.8 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 55 | SA | Ribosomal protein uS2 | polymer | 208 | 23360.8 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 56 | SB | Ribosomal protein eS1 | polymer | 213 | 24689.0 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 57 | SC | Ribosomal protein uS5 | polymer | 218 | 24091.5 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 58 | SE | Ribosomal protein eS4 | polymer | 262 | 29523.7 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 59 | SG | Ribosomal protein eS6 | polymer | 237 | 27471.5 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 60 | SH | Ribosomal protein eS7 | polymer | 189 | 21603.2 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 61 | SI | Ribosomal protein eS8 | polymer | 206 | 24003.0 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 62 | SJ | Ribosomal protein uS4 | polymer | 185 | 21649.6 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 63 | SL | Ribosomal protein uS17 | polymer | 152 | 17657.8 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 64 | SN | Ribosomal protein uS15 | polymer | 149 | 17057.1 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 65 | SO | Ribosomal protein uS11 | polymer | 136 | 14544.7 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 66 | SV | Ribosomal protein eS21 | polymer | 82 | 8977.2 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 67 | SW | Ribosomal protein uS8 | polymer | 129 | 14734.4 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 68 | SX | Ribosomal protein uS12 | polymer | 141 | 15636.4 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 69 | SY | Ribosomal protein eS24 | polymer | 126 | 14604.3 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 70 | Sa | Ribosomal protein eS26 | polymer | 98 | 11184.2 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 71 | Sb | Ribosomal protein eS27 | polymer | 83 | 9349.0 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 72 | Se | Ribosomal protein eS30 | polymer | 57 | 6440.6 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 73 | SD | Ribosomal protein uS3 | polymer | 227 | 25172.6 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 74 | SF | Ribosomal protein uS7 | polymer | 191 | 21525.9 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 75 | SK | Ribosomal protein eS10 | polymer | 98 | 11774.0 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 76 | SM | Ribosomal protein eS12 | polymer | 124 | 13776.0 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 77 | SP | Ribosomal protein uS19 | polymer | 96 | 11541.7 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 78 | SQ | Ribosomal protein uS9 | polymer | 141 | 15975.8 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 79 | SR | Ribosomal protein eS17 | polymer | 129 | 14969.4 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 80 | SS | Ribosomal protein uS13 | polymer | 137 | 16170.8 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 81 | ST | Ribosomal protein eS19 | polymer | 141 | 15668.0 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 82 | SU | Ribosomal protein uS10 | polymer | 104 | 11724.9 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 83 | SZ | Ribosomal protein es25 | polymer | 75 | 8526.1 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 84 | Sc | Ribosomal protein eS28 | polymer | 64 | 7263.4 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 85 | Sd | Ribosomal protein uS14 | polymer | 52 | 6199.2 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 86 | Sf | Ribosomal protein eS31 | polymer | 71 | 8358.9 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 87 | Sg | Ribosomal protein RACK1 | polymer | 313 | 34669.1 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 88 | S1 | SRP9 | polymer | 74 | 8705.1 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 89 | S4 | SRP14 | polymer | 76 | 8665.1 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 90 | 5, S2, 7, 8, D... | MAGNESIUM ION | non-polymer | 24.3 | 166 | Chemie (MG) | |||
| 91 | j, m, o, Sa | ZINC ION | non-polymer | 65.4 | 4 | Chemie (ZN) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 89 |
| Total formula weight | 3363436.0 | |
| Non-Polymers* | Number of molecules | 170 |
| Total formula weight | 4296.3 | |
| All* | Total formula weight | 3367732.2 |
