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3ID5

Crystal structure of Sulfolobus solfataricus C/D RNP assembled with Nop5, fibrillarin, L7Ae and a split half C/D RNA

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, E
(A, E)
Pre mRNA splicing proteinpolymer38844168.52UniProt (Q97ZH3)
Pfam (PF21572)
Pfam (PF01798)
Sulfolobus solfataricusNop5
2B, F
(B, F)
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferasepolymer23226439.42UniProt (P58032)
Pfam (PF01269)
Sulfolobus solfataricusfibrillarin, FIB
3C, G
(C, G)
50S ribosomal protein L7Aepolymer13014075.32UniProt (P55858)
Pfam (PF01248)
Sulfolobus solfataricus
4D, H
(D, H)
half C/D RNApolymer3511261.72
5I, J
(B, F)
S-ADENOSYLMETHIONINEnon-polymer398.42Chemie (SAM)
PubChem (5136)
PubChem (34755)
PubChem (58633578)
PubChem (60038769)
PubChem (73897310)
PubChem (58766358)
PubChem (87224684)
PubChem (131697735)
PubChem (9865603)
PubChem (145712080)
PubChem (12312798)
PubChem (132988922)
PubChem (134692588)
PubChem (135030730)
PubChem (140459785)
PubChem (163046094)
Sequence modifications
A, E: 1 - 380 (UniProt: Q97ZH3)
PDBExternal DatabaseDetails
Val 2Met 2engineered mutation
His 381-expression tag
His 382-expression tag
His 383-expression tag
His 384-expression tag
His 385-expression tag
His 386-expression tag
His 387-expression tag
His 388-expression tag
B, F: 1 - 232 (UniProt: P58032)
PDBExternal DatabaseDetails
Ala 2Ser 2engineered mutation
C, G: 4 - 130 (UniProt: P55858)
PDBExternal DatabaseDetails
Met 1-expression tag
Asp 2-expression tag
Ala 3-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains8
Total formula weight191889.7
Non-Polymers*Number of molecules2
Total formula weight796.9
All*Total formula weight192686.6
*Water molecules are not included.

253389

PDB entries from 2026-05-13

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