3ID5
Crystal structure of Sulfolobus solfataricus C/D RNP assembled with Nop5, fibrillarin, L7Ae and a split half C/D RNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL41XU |
Synchrotron site | SPring-8 |
Beamline | BL41XU |
Temperature [K] | 100 |
Wavelength(s) | 1.00821 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 265.485, 265.485, 129.434 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 20.000 - 4.010 |
R-factor | 0.286 |
Rwork | 0.285 |
R-free | 0.30400 |
Structure solution method | SIRAS |
RMSD bond length | 0.006 |
RMSD bond angle | 1.135 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | SHARP |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 4.070 |
High resolution limit [Å] | 4.000 | 4.000 |
Rmerge | 0.139 | 0.830 |
Number of reflections | 39544 | |
<I/σ(I)> | 17.5 | 1.6 |
Completeness [%] | 98.5 | 85.5 |
Redundancy | 12.3 | 4.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.6 | 293 | 1.7M (NH4)2SO4, 50mM Na cacodylate, pH 5.6, vapor diffusion, hanging drop, temperature 293K |