3HHQ
Crystal structure of apo dUT1p from Saccharomyces cerevisiae
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C, D, E... (A, B, C, D, E...) | Deoxyuridine 5'-triphosphate nucleotidohydrolase | polymer | 167 | 17494.6 | 24 | UniProt (P33317) Pfam (PF00692) | Saccharomyces cerevisiae (yeast) | dUTPase, dUTP pyrophosphatase |
2 | AB, AC, AD, BA, CA... (I, N, S, B, J...) | SULFATE ION | non-polymer | 96.1 | 35 | Chemie (SO4) | |||
3 | AA, BC, BD, ED, FA... (A, N, S, T, C...) | SODIUM ION | non-polymer | 23.0 | 14 | Chemie (NA) | |||
4 | BB, CC, DA, DB, DC... (I, N, B, J, C...) | CHLORIDE ION | non-polymer | 35.5 | 17 | Chemie (CL) | |||
5 | CD, EB, EC, FB, HC... (S, J, N, O, T...) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 34 | Chemie (EDO) | |||
6 | AE, BE, GB, HB, NB... (X, J, K, M, H) | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 7 | Chemie (PEG) | |||
7 | ND (U) | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) | |||
8 | CE, DE, EE, FE, GE... (A, B, C, D, E...) | water | water | 18.0 | 1732 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X: 1 - 147 (UniProt: P33317)
PDB | External Database | Details |
---|---|---|
Met -19 | - | expression tag |
Gly -18 | - | expression tag |
Ser -17 | - | expression tag |
Ser -16 | - | expression tag |
His -15 | - | expression tag |
His -14 | - | expression tag |
His -13 | - | expression tag |
His -12 | - | expression tag |
His -11 | - | expression tag |
His -10 | - | expression tag |
Ser -9 | - | expression tag |
Ser -8 | - | expression tag |
Gly -7 | - | expression tag |
Leu -6 | - | expression tag |
Val -5 | - | expression tag |
Pro -4 | - | expression tag |
Arg -3 | - | expression tag |
Gly -2 | - | expression tag |
Ser -1 | - | expression tag |
His 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 24 |
Total formula weight | 419871.4 | |
Non-Polymers* | Number of molecules | 108 |
Total formula weight | 7232.0 | |
All* | Total formula weight | 427103.4 |