3H32
Crystal structure of D-dimer from human fibrin complexed with Gly-His-Arg-Pro-Tyr-amide
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, D (A, D) | Fibrinogen alpha chain | polymer | 197 | 22771.7 | 2 | UniProt (P02671) Pfam (PF08702) | Homo sapiens (human) | Fibrinopeptide A |
| 2 | B, E (B, E) | Fibrinogen beta chain | polymer | 458 | 52026.1 | 2 | UniProt (P02675) Pfam (PF08702) Pfam (PF00147) | Homo sapiens (human) | Fibrinopeptide B |
| 3 | C, F (C, F) | Fibrinogen gamma chain, isoform gamma-A | polymer | 317 | 35817.6 | 2 | UniProt (P02679) Pfam (PF08702) Pfam (PF00147) | Homo sapiens (human) | |
| 4 | G, H (M, N) | Fibrin B knob pentapeptide | polymer | 5 | 630.7 | 2 | UniProt (P02676) | ||
| 5 | I, J (G, H) | N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1567.4 | 2 | In PDB GlyTouCan (G83007AG) | |||
| 6 | K, L, M, N (B, C, E, F) | CALCIUM ION | non-polymer | 40.1 | 4 | Chemie (CA) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 8 |
| Total formula weight | 222492.2 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 3134.8 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 160.3 | |
| All* | Total formula weight | 225787.3 |
