3H32
Crystal structure of D-dimer from human fibrin complexed with Gly-His-Arg-Pro-Tyr-amide
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, D | Fibrinogen alpha chain | polymer | 197 | 22771.7 | 2 | UniProt (P02671) Pfam (PF08702) In PDB | Homo sapiens (human) | Fibrinopeptide A |
2 | B, E | Fibrinogen beta chain | polymer | 458 | 52026.1 | 2 | UniProt (P02675) Pfam (PF08702) Pfam (PF00147) In PDB | Homo sapiens (human) | Fibrinopeptide B |
3 | C, F | Fibrinogen gamma chain, isoform gamma-A | polymer | 317 | 35817.6 | 2 | UniProt (P02679) Pfam (PF08702) Pfam (PF00147) In PDB | Homo sapiens (human) | |
4 | M, N | Fibrin B knob pentapeptide | polymer | 5 | 630.7 | 2 | UniProt (P02676) In PDB | ||
5 | G, H | N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1567.4 | 2 | In PDB GlyTouCan (G83007AG) | |||
6 | B, C, E, F | CALCIUM ION | non-polymer | 40.1 | 4 | Chemie (CA) |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 8 |
Total formula weight | 222492.2 | |
Branched | Number of molecules | 2 |
Total formula weight | 3134.8 | |
Non-Polymers* | Number of molecules | 4 |
Total formula weight | 160.3 | |
All* | Total formula weight | 225787.3 |