3F73
Alignment of guide-target seed duplex within an argonaute silencing complex
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B | ARGONAUTE | polymer | 685 | 76728.7 | 2 | UniProt (Q746M7) Pfam (PF22472) Pfam (PF18309) Pfam (PF22474) In PDB | Thermus thermophilus | |
2 | C, X | DNA (5'-D(P*DTP*DGP*DAP*DGP*DGP*DTP*DAP*DGP*DTP*DAP*DGP*DGP*DTP*DTP*DGP*DTP*DA*DTP*DAP*DGP*DT)-3') | polymer | 21 | 6588.3 | 2 | |||
3 | H, Y | RNA (5'-R(*UP*AP*UP*AP*CP*AP*A*CP*UP*CP*AP*CP*UP*AP*CP*CP*UP*CP*GP*U)-3') | polymer | 20 | 6248.8 | 2 | |||
4 | A, C, X | MAGNESIUM ION | non-polymer | 24.3 | 3 | Chemie (MG) | |||
5 | C | PHOSPHATE ION | non-polymer | 95.0 | 1 | Chemie (PO4) | |||
6 | water | water | 18.0 | 16 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 6 |
Total formula weight | 179131.5 | |
Non-Polymers* | Number of molecules | 4 |
Total formula weight | 167.9 | |
All* | Total formula weight | 179299.4 |