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3DA9

Crystal structure of thrombin in complex with inhibitor

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Thrombin light chainpolymer364096.51UniProt (P00734)
Pfam (PF09396)
Homo sapiens (human)Coagulation factor II, Activation peptide fragment 1, Activation peptide fragment 2, Thrombin light chain
2B
(B)
Thrombin heavy chainpolymer25929780.21UniProt (P00734)
Pfam (PF00089)
Homo sapiens (human)Coagulation factor II, Activation peptide fragment 1, Activation peptide fragment 2, Thrombin heavy chain
3C
(D)
Hirudin peptidepolymer91178.11
4D
(B)
SODIUM IONnon-polymer23.01Chemie (NA)
5E
(B)
beta-phenyl-D-phenylalanyl-N-propyl-L-prolinamidenon-polymer379.51Chemie (44U)
6F, G, H
(A, B, D)
waterwater18.0277Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight35054.8
Non-Polymers*Number of molecules2
Total formula weight402.5
All*Total formula weight35457.3
*Water molecules are not included.

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PDB entries from 2025-06-18

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