3CMD
Crystal structure of peptide deformylase from VRE-E.faecium
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Peptide deformylase | polymer | 196 | 21774.8 | 2 | UniProt (Q842S4) Pfam (PF01327) | Enterococcus faecium (Streptococcus faecium) | |
| 2 | C, I (A, B) | FE (III) ION | non-polymer | 55.8 | 2 | Chemie (FE) | |||
| 3 | D, E, J, K, L... (A, B) | SODIUM ION | non-polymer | 23.0 | 8 | Chemie (NA) | |||
| 4 | F, G, H, P (A, B) | MALONATE ION | non-polymer | 102.0 | 4 | Chemie (MLI) | |||
| 5 | Q, R (A, B) | water | water | 18.0 | 207 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 187 (UniProt: Q842S4)
| PDB | External Database | Details |
|---|---|---|
| Ser -8 | - | expression tag |
| Gly -7 | - | expression tag |
| Leu -6 | - | expression tag |
| Val -5 | - | expression tag |
| Pro -4 | - | expression tag |
| Gly -3 | - | expression tag |
| Arg -2 | - | expression tag |
| His -1 | - | expression tag |
| Met 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 43549.7 | |
| Non-Polymers* | Number of molecules | 14 |
| Total formula weight | 703.8 | |
| All* | Total formula weight | 44253.5 |
