3AVS
Catalytic fragment of UTX/KDM6A bound with N-oxyalylglycine, and Ni(II)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Lysine-specific demethylase 6A | polymer | 531 | 60264.4 | 1 | UniProt (O15550) Pfam (PF02373) Pfam (PF21322) Pfam (PF21326) | Homo sapiens (human) | Histone demethylase UTX, Ubiquitously-transcribed TPR protein on the X chromosome, Ubiquitously-transcribed X chromosome tetratricopeptide repeat protein |
| 2 | B (A) | N-OXALYLGLYCINE | non-polymer | 147.1 | 1 | Chemie (OGA) | |||
| 3 | C (A) | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
| 4 | D, E, F (A) | NICKEL (II) ION | non-polymer | 58.7 | 3 | Chemie (NI) | |||
| 5 | G (A) | CHLORIDE ION | non-polymer | 35.5 | 1 | Chemie (CL) | |||
| 6 | H, I, J, K, L... (A) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 10 | Chemie (EDO) | |||
| 7 | R (A) | water | water | 18.0 | 344 | Chemie (HOH) |
Sequence modifications
A: 880 - 1401 (UniProt: O15550)
| PDB | External Database | Details |
|---|---|---|
| Gly 871 | - | expression tag |
| Pro 872 | - | expression tag |
| Gly 873 | - | expression tag |
| Tyr 874 | - | expression tag |
| Gln 875 | - | expression tag |
| Asp 876 | - | expression tag |
| Pro 877 | - | expression tag |
| Asn 878 | - | expression tag |
| Ser 879 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 60264.4 | |
| Non-Polymers* | Number of molecules | 16 |
| Total formula weight | 1044.7 | |
| All* | Total formula weight | 61309.1 |
