2ZO9
Malonate-bound structure of the glycerophosphodiesterase from Enterobacter aerogenes (GpdQ) and characterization of the native Fe2+ metal ion preference
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (B, C) | Phosphohydrolase | polymer | 274 | 30772.6 | 2 | UniProt (Q6XBH1) Pfam (PF00149) | Enterobacter aerogenes | GpdQ, glycerophosphodiesterase |
| 2 | C, D, F, G (B, C) | FE (II) ION | non-polymer | 55.8 | 4 | Chemie (FE2) | |||
| 3 | E, H (B, C) | MALONATE ION | non-polymer | 102.0 | 2 | Chemie (MLI) | |||
| 4 | I, J (B, C) | water | water | 18.0 | 161 | Chemie (HOH) |
Sequence modifications
B, C: 1 - 274 (UniProt: Q6XBH1)
| PDB | External Database | Details |
|---|---|---|
| Ala 224 | Glu 224 | SEE REMARK 999 |
| Asp 227 | Arg 227 | SEE REMARK 999 |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 61545.3 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 427.5 | |
| All* | Total formula weight | 61972.8 |
