2YKG
Structural insights into RNA recognition by RIG-I
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | PROBABLE ATP-DEPENDENT RNA HELICASE DDX58 | polymer | 696 | 79682.8 | 1 | UniProt (O95786) Pfam (PF00270) Pfam (PF18119) Pfam (PF00271) Pfam (PF11648) | HOMO SAPIENS | DEAD BOX PROTEIN 58, RETINOIC ACID-INDUCIBLE GENE 1 PROTEIN, RIG-1, RETINOIC ACID-INDUCIBLE GENE I PROTEIN, RIG-I |
| 2 | B, C (C, D) | 5'-R(*GP*CP*GP*CP*GP*CP*GP*CP*GP*CP)-3' | polymer | 10 | 3207.0 | 2 | HOMO SAPIENS | ||
| 3 | D (A) | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
| 4 | E (A) | SULFATE ION | non-polymer | 96.1 | 1 | Chemie (SO4) | |||
| 5 | F, G, H (A, C, D) | water | water | 18.0 | 99 | Chemie (HOH) |
Sequence modifications
A: 230 - 925 (UniProt: O95786)
| PDB | External Database | Details |
|---|---|---|
| Asn 306 | Gln 306 | conflict |
| Thr 419 | Asn 419 | conflict |
| Asp 828 | Glu 828 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 86096.8 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 161.5 | |
| All* | Total formula weight | 86258.2 |
