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2X5O

Discovery of Novel 5-Benzylidenerhodanine- and 5-Benzylidene- thiazolidine-2,4-dione Inhibitors of MurD Ligase

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1AUDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASEpolymer43947157.51UniProt (P14900)
Pfam (PF21799)
Pfam (PF08245)
Pfam (PF02875)
In PDB
Escherichia coli DH5[alpha]UDP-N-ACETYLMURAMOYL-L-ALANYL-D-GLUTAMATE SYNTHETASE, D-GLUTAMIC ACID-ADDING ENZYMEMURD LIGASE
2AN-({3-[({4-[(Z)-(2,4-DIOXO-1,3-THIAZOLIDIN-5-YLIDENE)METHYL]PHENYL}AMINO)METHYL]PHENYL}CARBONYL)-D-GLUTAMIC ACIDnon-polymer483.51Chemie (VSV)
3AAZIDE IONnon-polymer42.01Chemie (AZI)
4ASULFATE IONnon-polymer96.12Chemie (SO4)
5ASULFITE IONnon-polymer80.11Chemie (SO3)
6ACHLORIDE IONnon-polymer35.54Chemie (CL)
7waterwater18.0535Chemie (HOH)
Sequence modifications
A: 1 - 437 (UniProt: P14900)
PDBExternal DatabaseDetails
Ser 438-expression tag
His 439-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight47157.5
Non-Polymers*Number of molecules9
Total formula weight939.5
All*Total formula weight48097.0
*Water molecules are not included.

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PDB entries from 2024-07-17

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