2W9C
Ternary complex of Dpo4 bound to N2,N2-dimethyl-deoxyguanosine modified DNA with incoming dTTP
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A (A) | DNA POLYMERASE IV | polymer | 358 | 41114.8 | 1 | UniProt (Q97W02) Pfam (PF00817) Pfam (PF11798) Pfam (PF11799) | SULFOLOBUS SOLFATARICUS | POL IV, DPO4 |
2 | B (B) | DNA POLYMERASE IV | polymer | 358 | 41086.8 | 1 | UniProt (Q97W02) Pfam (PF00817) Pfam (PF11798) Pfam (PF11799) | SULFOLOBUS SOLFATARICUS | POL IV, DPO4 |
3 | C, D (C, D) | 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP *TP*TP*DOCP)-3' | polymer | 13 | 4080.7 | 2 | |||
4 | E, F (E, F) | 5'-D(*TP*CP*AP*CP*O2GP*GP*AP*AP*TP*CP*CP *TP*TP*CP*CP*CP*CP*C)-3' | polymer | 18 | 5400.5 | 2 | TEMPLATE DNA | ||
5 | G, H, I, K, L... (A, B) | MAGNESIUM ION | non-polymer | 24.3 | 6 | Chemie (MG) | |||
6 | J, N (A, B) | THYMIDINE-5'-TRIPHOSPHATE | non-polymer | 482.2 | 2 | Chemie (TTP) | |||
7 | O, P, Q, R, S... (A, B, C, D, E...) | water | water | 18.0 | 109 | Chemie (HOH) |
Sequence modifications
A: -5 - 0 (PDB: 2W9C)
A: 1 - 352 (UniProt: Q97W02)
B: -5 - 0 (PDB: 2W9C)
B: 1 - 352 (UniProt: Q97W02)
A: 1 - 352 (UniProt: Q97W02)
PDB | External Database | Details |
---|---|---|
Arg 223 | Lys 223 | conflict |
B: 1 - 352 (UniProt: Q97W02)
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 6 |
Total formula weight | 101163.9 | |
Non-Polymers* | Number of molecules | 8 |
Total formula weight | 1110.2 | |
All* | Total formula weight | 102274.1 |