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2VC9

Family 89 Glycoside Hydrolase from Clostridium perfringens in complex with 2-acetamido-1,2-dideoxynojirmycin

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
ALPHA-N-ACETYLGLUCOSAMINIDASEpolymer891102273.21UniProt (Q0TST1)
Pfam (PF00754)
Pfam (PF12971)
Pfam (PF05089)
Pfam (PF12972)
UniProt (by SIFTS) (A0A0H2YU91)
CLOSTRIDIUM PERFRINGENS
2B
(A)
2-ACETAMIDO-1,2-DIDEOXYNOJIRMYCINnon-polymer204.21Chemie (NOK)
3C, D
(A)
GLYCEROLnon-polymer92.12Chemie (GOL)
4E
(A)
CALCIUM IONnon-polymer40.11Chemie (CA)
5F
(A)
waterwater18.0381Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight102273.2
Non-Polymers*Number of molecules4
Total formula weight428.5
All*Total formula weight102701.7
*Water molecules are not included.

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PDB entries from 2025-07-02

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