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2V4R

Non-productive complex of the Y-family DNA polymerase Dpo4 with dGTP skipping the M1dG adduct to pair with the next template cytosine

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
DNA POLYMERASE IVpolymer35841086.81UniProt (Q97W02)
Pfam (PF00817)
Pfam (PF11798)
Pfam (PF11799)
SULFOLOBUS SOLFATARICUS
2B
(P)
5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*C)-3'polymer134096.71synthetic construct
3C
(T)
5'-D(*TP*CP*AP*CP*M1GP*GP*AP*AP*TP*CP*CP *TP*TP*CP*CP*CP*CP*C)-3'polymer185408.51synthetic construct
4D
(A)
2'-DEOXYGUANOSINE-5'-TRIPHOSPHATEnon-polymer507.21Chemie (DGT)
5E, F, G
(A)
CALCIUM IONnon-polymer40.13Chemie (CA)
6H, I, J
(A, P, T)
waterwater18.0134Chemie (HOH)
Sequence modifications
A: 2 - 353 (UniProt: Q97W02)
PDBExternal DatabaseDetails
His -4-expression tag
His -3-expression tag
His -2-expression tag
His -1-expression tag
His 0-expression tag
His 1-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight50591.9
Non-Polymers*Number of molecules4
Total formula weight627.4
All*Total formula weight51219.4
*Water molecules are not included.

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PDB entries from 2025-06-18

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