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2QFX

Crystal structure of Saccharomyces cerevesiae mitochondrial NADP(+)-dependent isocitrate dehydrogenase in complex with NADPH, a-ketoglutarate and Ca(2+)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D, E...
(A, B, C, D, E...)
Isocitrate dehydrogenase [NADP]polymer42748143.16UniProt (P21954)
Pfam (PF00180)
Saccharomyces cerevisiae (yeast)Idp1p, Oxalosuccinate decarboxylase, IDH, NADP+, -specific ICDH, IDP
2G, J, M, P, S...
(A, B, C, D, E...)
CALCIUM IONnon-polymer40.16Chemie (CA)
3H, K, N, Q, T...
(A, B, C, D, E...)
NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATEnon-polymer745.46Chemie (NDP)
4I, L, O, R, U...
(A, B, C, D, E...)
2-OXOGLUTARIC ACIDnon-polymer146.16Chemie (AKG)
5AA, BA, CA, DA, Y...
(C, D, E, F, A...)
waterwater18.0227Chemie (HOH)
Sequence modifications
A, B, C, D, E, F: 1 - 413 (UniProt: P21954)
PDBExternal DatabaseDetails
Met -13-expression tag
His -12-expression tag
His -11-expression tag
His -10-expression tag
His -9-expression tag
His -8-expression tag
His -7-expression tag
Ala -6-expression tag
Met -5-expression tag
Gly -4-expression tag
Ile -3-expression tag
Pro -2-expression tag
Gly -1-expression tag
His 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight288858.5
Non-Polymers*Number of molecules18
Total formula weight5589.6
All*Total formula weight294448.1
*Water molecules are not included.

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PDB entries from 2026-01-14

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