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2QFX

Crystal structure of Saccharomyces cerevesiae mitochondrial NADP(+)-dependent isocitrate dehydrogenase in complex with NADPH, a-ketoglutarate and Ca(2+)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE AR-NW12A
Synchrotron sitePhoton Factory
BeamlineAR-NW12A
Temperature [K]95
Detector technologyCCD
Collection date2006-11-17
DetectorADSC QUANTUM 210
Wavelength(s)1.0000
Spacegroup nameP 1 2 1
Unit cell lengths113.415, 99.630, 129.950
Unit cell angles90.00, 111.21, 90.00
Refinement procedure
Resolution49.730 - 2.700
Rwork0.217
R-free0.28500
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2qfw
RMSD bond length0.007
RMSD bond angle1.400
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareCNS
Refinement softwareCNS
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.800
High resolution limit [Å]2.7002.700
Rmerge0.0490.540
Number of reflections73998
<I/σ(I)>153.2
Completeness [%]98.697.6
Redundancy5.24.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.2293100mM Tris-HCl, 25% PEG 4000, 0.2M Na-acetate, 4% 1,3-propanediol, pH 8.2, VAPOR DIFFUSION, HANGING DROP, temperature 293K

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