2OKC
Crystal structure of Type I restriction enzyme StySJI M protein (NP_813429.1) from Bacteroides thetaiotaomicron VPI-5482 at 2.20 A resolution
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Type I restriction enzyme StySJI M protein | polymer | 445 | 50657.6 | 2 | UniProt (Q89Z59) Pfam (PF12161) Pfam (PF02384) | Bacteroides thetaiotaomicron VPI-5482 | |
| 2 | C, G (A, B) | S-ADENOSYLMETHIONINE | non-polymer | 398.4 | 2 | Chemie (SAM) PubChem (5136) PubChem (34755) PubChem (58633578) PubChem (60038769) PubChem (58766358) PubChem (73897310) PubChem (9865603) PubChem (87224684) PubChem (12312798) PubChem (131697735) PubChem (145712080) PubChem (132988922) PubChem (134692588) PubChem (135030730) PubChem (140459785) PubChem (163046094) | |||
| 3 | D (A) | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) PubChem (753) | |||
| 4 | E, H (A, B) | ISOPROPYL ALCOHOL | non-polymer | 60.1 | 2 | Chemie (IPA) | |||
| 5 | F (B) | CHLORIDE ION | non-polymer | 35.5 | 1 | Chemie (CL) PubChem (312) | |||
| 6 | I, J (A, B) | water | water | 18.0 | 348 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 444 (UniProt: Q89Z59)
| PDB | External Database | Details |
|---|---|---|
| Gly 0 | - | expression tag |
| Mse 1 | Met 1 | modified residue |
| Mse 44 | Met 44 | modified residue |
| Mse 51 | Met 51 | modified residue |
| Mse 116 | Met 116 | modified residue |
| Mse 125 | Met 125 | modified residue |
| Mse 162 | Met 162 | modified residue |
| Mse 170 | Met 170 | modified residue |
| Mse 192 | Met 192 | modified residue |
| Mse 225 | Met 225 | modified residue |
| Mse 292 | Met 292 | modified residue |
| Mse 293 | Met 293 | modified residue |
| Mse 295 | Met 295 | modified residue |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 101315.2 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 1044.6 | |
| All* | Total formula weight | 102359.8 |






