2OKC
Crystal structure of Type I restriction enzyme StySJI M protein (NP_813429.1) from Bacteroides thetaiotaomicron VPI-5482 at 2.20 A resolution
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0003676 | molecular_function | nucleic acid binding |
| A | 0003677 | molecular_function | DNA binding |
| A | 0008168 | molecular_function | methyltransferase activity |
| A | 0008170 | molecular_function | N-methyltransferase activity |
| A | 0009007 | molecular_function | site-specific DNA-methyltransferase (adenine-specific) activity |
| A | 0009307 | biological_process | DNA restriction-modification system |
| A | 0016740 | molecular_function | transferase activity |
| A | 0032259 | biological_process | methylation |
| B | 0003676 | molecular_function | nucleic acid binding |
| B | 0003677 | molecular_function | DNA binding |
| B | 0008168 | molecular_function | methyltransferase activity |
| B | 0008170 | molecular_function | N-methyltransferase activity |
| B | 0009007 | molecular_function | site-specific DNA-methyltransferase (adenine-specific) activity |
| B | 0009307 | biological_process | DNA restriction-modification system |
| B | 0016740 | molecular_function | transferase activity |
| B | 0032259 | biological_process | methylation |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 23 |
| Details | BINDING SITE FOR RESIDUE SAM A 500 |
| Chain | Residue |
| A | GLN151 |
| A | THR181 |
| A | GLY183 |
| A | PHE184 |
| A | ASP214 |
| A | ASN215 |
| A | THR216 |
| A | GLU242 |
| A | ASP243 |
| A | SER244 |
| A | ASN259 |
| A | TYR152 |
| A | PRO261 |
| A | PHE288 |
| A | HOH536 |
| A | HOH576 |
| A | PHE153 |
| A | THR154 |
| A | ARG156 |
| A | PRO177 |
| A | ALA178 |
| A | CYS179 |
| A | GLY180 |
| site_id | AC2 |
| Number of Residues | 25 |
| Details | BINDING SITE FOR RESIDUE SAM B 500 |
| Chain | Residue |
| B | GLN151 |
| B | TYR152 |
| B | PHE153 |
| B | THR154 |
| B | ARG156 |
| B | PRO177 |
| B | ALA178 |
| B | CYS179 |
| B | GLY180 |
| B | THR181 |
| B | GLY183 |
| B | PHE184 |
| B | ASP214 |
| B | ASN215 |
| B | THR216 |
| B | GLU242 |
| B | ASP243 |
| B | SER244 |
| B | ASN259 |
| B | PRO261 |
| B | PHE288 |
| B | HOH525 |
| B | HOH537 |
| B | HOH562 |
| B | HOH628 |
| site_id | AC3 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE GOL A 501 |
| Chain | Residue |
| A | HIS331 |
| A | TYR392 |
| A | ARG395 |
| A | HOH627 |
| site_id | AC4 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE IPA A 502 |
| Chain | Residue |
| A | LEU138 |
| A | ASN141 |
| A | GLY142 |
| A | ALA149 |
| A | PHE153 |
| site_id | AC5 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE IPA B 501 |
| Chain | Residue |
| B | ASP164 |
| B | ARG382 |
| B | ASP386 |
Functional Information from PROSITE/UniProt
| site_id | PS00092 |
| Number of Residues | 7 |
| Details | N6_MTASE N-6 Adenine-specific DNA methylases signature. ILANPPF |
| Chain | Residue | Details |
| A | ILE256-PHE262 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 18 |
| Details | Binding site: {"evidences":[{"source":"Reference","evidenceCode":"ECO:0000269","citation":{"citationType":"submission","publicationDate":"JAN-2007","submissionDatabase":"PDB data bank","title":"Crystal structure of type I restriction enzyme protein (NP_813429.1) from bacteriodes thetaiotaomicron VPI-5482 at 2.20 A resolution resolution.","authoringGroup":["Joint center for structural genomics (JCSG)"]}},{"source":"PDB","id":"2OKC","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
