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1YTU

Structural basis for 5'-end-specific recognition of the guide RNA strand by the A. fulgidus PIWI protein

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1C, E5'-R(P*AP*GP*AP*CP*AP*G)-3'polymer61938.32
2D, F5'-R(P*UP*GP*UP*C)-3'polymer41217.82
3A, Bhypothetical protein AF1318polymer42749818.32UniProt (O28951)
Pfam (PF02171)
In PDB
Archaeoglobus fulgidusPIWI
4A, BMAGNESIUM IONnon-polymer24.32Chemie (MG)
5waterwater18.057Chemie (HOH)
Sequence modifications
A, B: 1 - 427 (UniProt: O28951)
PDBExternal DatabaseDetails
Mse 1Met 1modified residue
Mse 2Met 2modified residue
Mse 112Met 112modified residue
Mse 139Met 139modified residue
Mse 200Met 200modified residue
Mse 208Met 208modified residue
Mse 260Met 260modified residue
Mse 280Met 280modified residue
Mse 301Met 301modified residue
Mse 339Met 339modified residue
Mse 377Met 377modified residue
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight105948.6
Non-Polymers*Number of molecules2
Total formula weight48.6
All*Total formula weight105997.2
*Water molecules are not included.

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PDB entries from 2024-06-12

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