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1SKM

HhaI methyltransferase in complex with DNA containing an abasic south carbocyclic sugar at its target site

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(C)
5'-D(*TP*CP*CP*AP*TP*GP*CP*GP*CP*TP*GP*AP*C)-3'polymer133927.61
2B
(D)
5'-D(*T*GP*TP*CP*AP*GP*(HCX)P*GP*CP*AP*TP*GP*G)-3'polymer133892.61
3C
(A)
Modification methylase HhaIpolymer32737042.21UniProt (P05102)
Pfam (PF00145)
Haemophilus haemolyticusCytosine-specific methyltransferase HhaI, M.HhaI
4D
(A)
S-ADENOSYL-L-HOMOCYSTEINEnon-polymer384.41Chemie (SAH)
5E, F, G
(C, D, A)
waterwater18.0257Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight44862.3
Non-Polymers*Number of molecules1
Total formula weight384.4
All*Total formula weight45246.7
*Water molecules are not included.

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PDB entries from 2025-12-24

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