1SB7
Crystal structure of the E.coli pseudouridine synthase TruD
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | tRNA pseudouridine synthase D | polymer | 368 | 41368.1 | 2 | UniProt (Q57261) Pfam (PF01142) | Escherichia coli | Pseudouridylate synthase, Uracil hydrolyase |
| 2 | C, D, F, G, H... (A, B) | GLYCEROL | non-polymer | 92.1 | 6 | Chemie (GOL) | |||
| 3 | E (B) | PHOSPHATE ION | non-polymer | 95.0 | 1 | Chemie (PO4) | |||
| 4 | J, K (A, B) | water | water | 18.0 | 258 | Chemie (HOH) |
Sequence modifications
A, B: -18 - 349 (UniProt: Q57261)
| PDB | External Database | Details |
|---|---|---|
| Gly -18 | - | cloning artifact |
| Ser -17 | - | cloning artifact |
| Ser -16 | - | cloning artifact |
| His -15 | - | cloning artifact |
| His -14 | - | cloning artifact |
| His -13 | - | cloning artifact |
| His -12 | - | cloning artifact |
| His -11 | - | cloning artifact |
| His -10 | - | cloning artifact |
| Ser -9 | - | cloning artifact |
| Ser -8 | - | cloning artifact |
| Gly -7 | - | cloning artifact |
| Leu -6 | - | cloning artifact |
| Val -5 | - | cloning artifact |
| Pro -4 | - | cloning artifact |
| Arg -3 | - | cloning artifact |
| Gly -2 | - | cloning artifact |
| Ser -1 | - | cloning artifact |
| His 0 | - | cloning artifact |
| Mse 1 | Met 1 | modified residue |
| Mse 98 | Met 98 | modified residue |
| Mse 254 | Met 254 | modified residue |
| Mse 301 | Met 301 | modified residue |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 82736.3 | |
| Non-Polymers* | Number of molecules | 7 |
| Total formula weight | 647.5 | |
| All* | Total formula weight | 83383.8 |
