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1NHC

Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D, E...Polygalacturonase Ipolymer33634891.56UniProt (P26213)
Pfam (PF00295)
In PDB
Aspergillus nigerPG-I, Pectinase, endopolygalacturonase I
2G2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched424.41In PDB
GlyTouCan (G42666HT)
3Halpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched1073.01In PDB
GlyTouCan (G94106MV)
4Ialpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched586.51In PDB
GlyTouCan (G62182OO)
5D, E, A, F, B...alpha-D-mannopyranosenon-polymer180.211Chemie (MAN)
6D, E, A, F, B...SULFATE IONnon-polymer96.116Chemie (SO4)
7D, E, A, F, BGLYCEROLnon-polymer92.15Chemie (GOL)
8E, F, C2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.23Chemie (NAG)
9waterwater18.01353Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight209349.1
BranchedNumber of molecules3
Total formula weight2083.9
Non-Polymers*Number of molecules35
Total formula weight4642.8
All*Total formula weight216075.8
*Water molecules are not included.

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PDB entries from 2024-09-25

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