1NHC
Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0004650 | molecular_function | polygalacturonase activity |
| A | 0005576 | cellular_component | extracellular region |
| A | 0005975 | biological_process | carbohydrate metabolic process |
| A | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
| A | 0045490 | biological_process | pectin catabolic process |
| A | 0071555 | biological_process | cell wall organization |
| B | 0004650 | molecular_function | polygalacturonase activity |
| B | 0005576 | cellular_component | extracellular region |
| B | 0005975 | biological_process | carbohydrate metabolic process |
| B | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
| B | 0045490 | biological_process | pectin catabolic process |
| B | 0071555 | biological_process | cell wall organization |
| C | 0004650 | molecular_function | polygalacturonase activity |
| C | 0005576 | cellular_component | extracellular region |
| C | 0005975 | biological_process | carbohydrate metabolic process |
| C | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
| C | 0045490 | biological_process | pectin catabolic process |
| C | 0071555 | biological_process | cell wall organization |
| D | 0004650 | molecular_function | polygalacturonase activity |
| D | 0005576 | cellular_component | extracellular region |
| D | 0005975 | biological_process | carbohydrate metabolic process |
| D | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
| D | 0045490 | biological_process | pectin catabolic process |
| D | 0071555 | biological_process | cell wall organization |
| E | 0004650 | molecular_function | polygalacturonase activity |
| E | 0005576 | cellular_component | extracellular region |
| E | 0005975 | biological_process | carbohydrate metabolic process |
| E | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
| E | 0045490 | biological_process | pectin catabolic process |
| E | 0071555 | biological_process | cell wall organization |
| F | 0004650 | molecular_function | polygalacturonase activity |
| F | 0005576 | cellular_component | extracellular region |
| F | 0005975 | biological_process | carbohydrate metabolic process |
| F | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
| F | 0045490 | biological_process | pectin catabolic process |
| F | 0071555 | biological_process | cell wall organization |
Functional Information from PROSITE/UniProt
| site_id | PS00502 |
| Number of Residues | 14 |
| Details | POLYGALACTURONASE Polygalacturonase active site. GgtCsgGHGLs.IGS |
| Chain | Residue | Details |
| A | GLY222-SER235 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 6 |
| Details | ACT_SITE: Proton donor => ECO:0000255|PROSITE-ProRule:PRU10052 |
| Chain | Residue | Details |
| A | ASP207 | |
| B | ASP207 | |
| C | ASP207 | |
| D | ASP207 | |
| E | ASP207 | |
| F | ASP207 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 6 |
| Details | ACT_SITE: ACT_SITE => ECO:0000305 |
| Chain | Residue | Details |
| A | HIS229 | |
| B | HIS229 | |
| C | HIS229 | |
| D | HIS229 | |
| E | HIS229 | |
| F | HIS229 |
| site_id | SWS_FT_FI3 |
| Number of Residues | 12 |
| Details | CARBOHYD: O-linked (Man) serine => ECO:0000269|PubMed:14623112 |
| Chain | Residue | Details |
| A | SER44 | |
| E | SER46 | |
| F | SER44 | |
| F | SER46 | |
| A | SER46 | |
| B | SER44 | |
| B | SER46 | |
| C | SER44 | |
| C | SER46 | |
| D | SER44 | |
| D | SER46 | |
| E | SER44 |
| site_id | SWS_FT_FI4 |
| Number of Residues | 6 |
| Details | CARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000305|PubMed:14623112 |
| Chain | Residue | Details |
| A | ASN246 | |
| B | ASN246 | |
| C | ASN246 | |
| D | ASN246 | |
| E | ASN246 | |
| F | ASN246 |
Catalytic Information from CSA
| site_id | CSA1 |
| Number of Residues | 4 |
| Details | Annotated By Reference To The Literature 1czf |
| Chain | Residue | Details |
| A | ASP207 | |
| A | ASP208 | |
| A | ASP186 | |
| A | HIS229 |
| site_id | CSA2 |
| Number of Residues | 4 |
| Details | Annotated By Reference To The Literature 1czf |
| Chain | Residue | Details |
| B | ASP207 | |
| B | ASP208 | |
| B | ASP186 | |
| B | HIS229 |
| site_id | CSA3 |
| Number of Residues | 4 |
| Details | Annotated By Reference To The Literature 1czf |
| Chain | Residue | Details |
| C | ASP207 | |
| C | ASP208 | |
| C | ASP186 | |
| C | HIS229 |
| site_id | CSA4 |
| Number of Residues | 4 |
| Details | Annotated By Reference To The Literature 1czf |
| Chain | Residue | Details |
| D | ASP207 | |
| D | ASP208 | |
| D | ASP186 | |
| D | HIS229 |
| site_id | CSA5 |
| Number of Residues | 4 |
| Details | Annotated By Reference To The Literature 1czf |
| Chain | Residue | Details |
| E | ASP207 | |
| E | ASP208 | |
| E | ASP186 | |
| E | HIS229 |
| site_id | CSA6 |
| Number of Residues | 4 |
| Details | Annotated By Reference To The Literature 1czf |
| Chain | Residue | Details |
| F | ASP207 | |
| F | ASP208 | |
| F | ASP186 | |
| F | HIS229 |
